Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01450 ATGATTAGAAATCTAAACGCGACTGATACTGCAAAAAGAAAGGAAGCGCATACAATTGATGAGAAAGCAAAGGCAGAAGCTAGTAAATCAACACAATTGTCAAGATTAAATGATGTACGGATTGTCAGAGTATCACGAGGCTTTGGAGGAAAAGACAGACACAGCAAAGTTTGCACTGTGAGAGGATTGAGAGACAGAAGGGTTAGGCTATCAGTACCAACAGCAATTCAATTATATGATCTTCAAGATAGGTTAGGGCTCAGTCAGCCTAGCAAAGTGGTTGATTGGTTGCTAAATATAGCTAAGCAAGACATTGATAAACTGCCGCCACTGCCTATGCTTCCTGGAAACTTTGGCCTGGATCATTCATCTGGTGTACCCTCTGCTCATCAAGTCAGCAATCCTTCACTTAACGAAGGAGGATTCAACTTTAGTAAGAATATAGACTTGCAGGGTTCCAATGGATTAACTAGTCAAAACTCTTGGACTTCCGATACTCATTGGAGATCAAACACTAAACTACACAGAGAAACAGCCATTACTAAGAAAGATGAGTGGATCACTACTAGTAGAGATGGAGAAAGGAGAAAAGAAAGCAGTGAATGTCATGGTGAAAGTACAAATGTCTCGTCAAGTAATCTGTCACAGAGAGGAAATCATCCACCAATGTTGGGTTTTCTAAATGGCATGCCATTGGGTTATCATTGGGAGCCTTCTAATCTTTCATTATCTCAATCAAGAAACCATGGTTTCACATACCAAGTAGATGATCGAAGCAATAATGTTGACGTTGCTTCACTGCCATCGGCGCCATCTTTATCAACTGGGATGCCTCAGTTTTTGGTATGTTCACCTGGAGTAGCGCAATCCTATAACCCTTCACATGTTACATCTTCAATGGAGATCGATCCTACAAATATAAACCTAGCTGTGCATGCAGGTCAGATGATGAGCACAAGCTCACAGCTGCAGTTGTCAAATTCATTCAACTCTTCCTTATATCGTATAAGCCAACCTATGAAATCTATCAACTTGGGTATGACGACTGATAACCCCTACCATTCAGCAGATAACAGTAACAGCCAATCACATAAAATTCGGGATTTTCCTTTCTAG 1116 0.4068 MIRNLNATDTAKRKEAHTIDEKAKAEASKSTQLSRLNDVRIVRVSRGFGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNIAKQDIDKLPPLPMLPGNFGLDHSSGVPSAHQVSNPSLNEGGFNFSKNIDLQGSNGLTSQNSWTSDTHWRSNTKLHRETAITKKDEWITTSRDGERRKESSECHGESTNVSSSNLSQRGNHPPMLGFLNGMPLGYHWEPSNLSLSQSRNHGFTYQVDDRSNNVDVASLPSAPSLSTGMPQFLVCSPGVAQSYNPSHVTSSMEIDPTNINLAVHAGQMMSTSSQLQLSNSFNSSLYRISQPMKSINLGMTTDNPYHSADNSNSQSHKIRDFPF* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01450 371 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 324 IPR005333 GO:0003700
Pte13g01450 371 MobiDBLite consensus disorder prediction 1 31 - -
Pte13g01450 371 Pfam TCP family transcription factor 50 198 IPR017887 -
Pte13g01450 371 MobiDBLite consensus disorder prediction 185 203 - -
Pte13g01450 371 MobiDBLite consensus disorder prediction 204 219 - -
Pte13g01450 371 MobiDBLite consensus disorder prediction 8 28 - -
Pte13g01450 371 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Pte13g01450 371 MobiDBLite consensus disorder prediction 185 220 - -
Pte13g01450 371 MobiDBLite consensus disorder prediction 347 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01450 Pte-Chr13 26094158 26098036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01450 38 120 TCP Transcription Factor Family AT3G02150 79.518 8.32e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte13g01450 TCP 1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01450 - - qsu:112005004 296.975