Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01440 ATGTATCAAGCAAAGAATGTCCCCAGTTCTAGTCTAGCTGGGGGAAACTCATTAGTTCATGGTCAACTTGTTGATTCTGGTGGGCCAGCTGCTGCCTCAATGGATTCCATGAATGGAGGGAGCAATAATTCTAATCTTACATCCAAGCAACGACTGCGTTGGACACATGAACTTCATGAGCGTTTTGTTGATTCTGTGGCACAACTTGGGGGCCCAGATCGTGCCACACCCAAAGGGGTTCTCAGATTAATGGGTGTCCCAGGTTTGACAATATACCATGTAAAAAGTCATTTGCAGAAATATCGACTTGCGAAATACCTCCCTGATTCGGTATCTGATGGAAAAAATGCTGATAAGAAAGAGACAGGCGACATGCTTTCCAATCTAGATGGTTCACCTGGAATGCAAATTACCGAAGCACTGAAGCTGCAGATGGAGGTGCAGAAGCGACTGCATGAGCAACTAGAGGTTCAGCGACAGCTGCAGTTAAGAATAGAAGCTCAAGGCAAATACTTGAAGAAGATAATTGAAGAGCAACAGCGACTTAGTGGAGTTCTTTCAGAAGTACCAGACTCTGGGGTTGCGGCCTCTTTGCCAGGTGATATATATCCAGCAACTCCTGCTCCTATATCTGAATCTTCCATTCAGGACAAAGCTGCTAAAGAGCGTGCCACAACAAAAAGCATCTCAATTGACGAATCTTTCTCATCTCACCATGAACCATTGACGCCAGATTCTGATTGCCCTGTTGTTTCCCCTGCCGATAGTCCTGAAGGGGATAGATCATCAAAGAAGCAACGGTTGAGTATGGGTGGAGCATATCCTAAACCAGACATGGTACTCCCACATCAGATACTCGAATCAAGTTTGAGCTCATCGTATCAGCAAGCACACCCGGTTGTGTTCACTAGAGATCATTATGATCCTTCATCTGGTTTATCTGCGGGGAAAGAAGATCAATCGCAAAAGGCTGGTGGCTGCGATTTGTGA 990 0.4545 MYQAKNVPSSSLAGGNSLVHGQLVDSGGPAAASMDSMNGGSNNSNLTSKQRLRWTHELHERFVDSVAQLGGPDRATPKGVLRLMGVPGLTIYHVKSHLQKYRLAKYLPDSVSDGKNADKKETGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEVPDSGVAASLPGDIYPATPAPISESSIQDKAAKERATTKSISIDESFSSHHEPLTPDSDCPVVSPADSPEGDRSSKKQRLSMGGAYPKPDMVLPHQILESSLSSSYQQAHPVVFTRDHYDPSSGLSAGKEDQSQKAGGCDL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01440 329 Gene3D - 48 107 - -
Pte13g01440 329 MobiDBLite consensus disorder prediction 1 17 - -
Pte13g01440 329 MobiDBLite consensus disorder prediction 205 329 - -
Pte13g01440 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 106 IPR017930 -
Pte13g01440 329 MobiDBLite consensus disorder prediction 112 132 - -
Pte13g01440 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 44 314 IPR044848 GO:0003700
Pte13g01440 329 MobiDBLite consensus disorder prediction 1 46 - -
Pte13g01440 329 MobiDBLite consensus disorder prediction 285 299 - -
Pte13g01440 329 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Pte13g01440 329 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
Pte13g01440 329 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Pte13g01440 329 Coils Coil 138 158 - -
Pte13g01440 329 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Pte13g01440 329 FunFam Myb family transcription factor 48 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01440 Pte-Chr13 25840476 25844426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01440 84 330 G2-like Transcription Factor Family AT2G01060 65.726 7.62e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte13g01440 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01440 - - tcc:18597377 468.774