Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01410 ATGCAGGCTAGAGAAATGACAAGCCTCCATTATCTAACGCCTTTAAACACTGGTTCATGCCAAAATGGTTATAGCATGATTTCTCATAGTACCACAACTCAGTATCCAATTAATAGTAGGTGCTCTCATCCATTGTATAATTTACAAACCCCACCACAAGTTCAAGAATTTAGTCCACCCTCTTCATGTTTCAGTAGTAATTCAACTTCAGACGAAGCTGAAGAACAGCAACAGCAGCAAAGTCTAATCCATGAAAGGAAAAAGAGAAGGATGATATCAAACAGAGAGTCTGCACGCAGATCTCGTATGAGAAAGCAAAGGCACCTTGATGAGCTTTGGTCCCAAGTTGTGTGGCTCCGAAATGAGAATCATCAACTTATAGATAAGCTGAACCATGCGTCGGAGTCTCATGAGAGAGTTGTCCAAGAGAATATTCAGCTCAAAGAAGAAGCTTCAGAGCTTCGTCAAATGCTCGGTGACATGCAACTGCGTAGTCCTTTCTCTACTTTCAGAGACCTTGATGATATTGACTGCAACACAGATTTTCTCAGAGCTGACGATTCCTCAAACCCATCCATCACAAATTCCAGTGATCTCCTTTGTTAA 606 0.4142 MQAREMTSLHYLTPLNTGSCQNGYSMISHSTTTQYPINSRCSHPLYNLQTPPQVQEFSPPSSCFSSNSTSDEAEEQQQQQSLIHERKKRRMISNRESARRSRMRKQRHLDELWSQVVWLRNENHQLIDKLNHASESHERVVQENIQLKEEASELRQMLGDMQLRSPFSTFRDLDDIDCNTDFLRADDSSNPSITNSSDLLC* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01410 201 MobiDBLite consensus disorder prediction 50 77 - -
Pte13g01410 201 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
Pte13g01410 201 MobiDBLite consensus disorder prediction 50 103 - -
Pte13g01410 201 Gene3D - 84 139 - -
Pte13g01410 201 Coils Coil 130 164 - -
Pte13g01410 201 SUPERFAMILY Leucine zipper domain 86 136 IPR046347 GO:0003700|GO:0006355
Pte13g01410 201 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 147 IPR004827 GO:0003700|GO:0006355
Pte13g01410 201 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 171 IPR044521 -
Pte13g01410 201 CDD bZIP_plant_GBF1 87 137 IPR045314 GO:0003700|GO:0006355
Pte13g01410 201 FunFam BZIP transcription factor 84 135 - -
Pte13g01410 201 Pfam bZIP transcription factor 86 136 IPR004827 GO:0003700|GO:0006355
Pte13g01410 201 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Pte13g01410 201 MobiDBLite consensus disorder prediction 78 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01410 Pte-Chr13 25254406 25255011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01410 5 172 bZIP Transcription Factor Family AT3G30530 57.895 1.65e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte13g01410 bZIP_1 3.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01410 - - qsa:O6P43_009221 252.677