Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01383 ATGTCAATGGCAACTGACGCTACGGCGAAGTTCCAAAAACCCGACTTCCGCCCAGTTCCGCAGCCACCAGATTACCATCCAGAAATAATTGTGTCTGCGCACGATGGCCTTCAATTTTGGCAGTTTATGGTTGCTGGTTCAGTTGCAGGTTGCGTTGAGCACATGGCCATGTTCCCTGTTGACACTGTGAAGACCCATATGCAAGCGCTTGGATCATGTCCTATTAAGTCAGCCGGTGTTCGACAAGCCCTTCAATCGATTTTGAAAACTGAAGGACCGTCTGGGTTGTACCGTGGCATTGCTGCTATGGGACTAGGTGCTGGACCAGCTCATGCCGTGTATTTTTCTGTTTATGAGATGTGTAAGAAGTTCTTCTCTGGTGGGGATCCTAATAACTCAGCAGCGCATGCTATTTCTGGTGTATTTTCTACTATTGCAAGTGATGCCGTGTTTACACCTATGGATATGGTGAAGCAGAGACTGCAATTGTCTAACAGTCATTACAAGGGTGTTTGGGACTGTGTCAAGACGGTGTTGAAGGAAGAAGGCTTTAAAGCTTTCTATGCGTCCTATAAGACAACAATTTTGATGAACGCGCCTTTTACAGCTGTGCATTTTGCAACCTATGAAGCTGCTAAGAAGGGTTTAATGGGGGTGTCTCCTGAGCATGCAGATGACGAAAGATTGGTTGTTCATGCTACTGCTGGAGCTGCAGCTGGGGGTTTGGCTGCTGCTGTCACTACTCCACTTGATGTTGTTAAGACGCAATTGCAATGTCAGGGTGTCTGTGGATGTGACAGATTTAAAAGCGGTTCAATTGGCGATGTGATTCAAACAATAGTGAAAAAGGATGGATACAGAGGGCTTATGAGGGGTTGGATTCCACGGATGCTATTCCATGCCCCTGCTGCTGCAATCTGCTGGTCCACCTATGAAGCAGGGAAGAGTTTTTTTCACGAATGGAATGAAACTTCGAAATAA 981 0.4638 MSMATDATAKFQKPDFRPVPQPPDYHPEIIVSAHDGLQFWQFMVAGSVAGCVEHMAMFPVDTVKTHMQALGSCPIKSAGVRQALQSILKTEGPSGLYRGIAAMGLGAGPAHAVYFSVYEMCKKFFSGGDPNNSAAHAISGVFSTIASDAVFTPMDMVKQRLQLSNSHYKGVWDCVKTVLKEEGFKAFYASYKTTILMNAPFTAVHFATYEAAKKGLMGVSPEHADDERLVVHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIQTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFHEWNETSK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01383 326 PRINTS Mitochondrial carrier protein signature 236 258 IPR002067 GO:0055085
Pte13g01383 326 PRINTS Mitochondrial carrier protein signature 42 55 IPR002067 GO:0055085
Pte13g01383 326 PRINTS Mitochondrial carrier protein signature 146 164 IPR002067 GO:0055085
Pte13g01383 326 PRINTS Mitochondrial carrier protein signature 188 206 IPR002067 GO:0055085
Pte13g01383 326 PRINTS Mitochondrial carrier protein signature 55 69 IPR002067 GO:0055085
Pte13g01383 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 37 124 IPR018108 -
Pte13g01383 326 Gene3D Mitochondrial carrier domain 131 326 IPR023395 -
Pte13g01383 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 131 215 IPR018108 -
Pte13g01383 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 317 IPR018108 -
Pte13g01383 326 FunFam Mitochondrial RNA-splicing protein MRS3 166 326 - -
Pte13g01383 326 SUPERFAMILY Mitochondrial carrier 35 312 IPR023395 -
Pte13g01383 326 Pfam Mitochondrial carrier protein 37 126 IPR018108 -
Pte13g01383 326 Pfam Mitochondrial carrier protein 228 319 IPR018108 -
Pte13g01383 326 Pfam Mitochondrial carrier protein 132 217 IPR018108 -
Pte13g01383 326 PANTHER MITOFERRIN-1-RELATED 34 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01383 Pte-Chr13 24217262 24220995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01383 3 322 Chloroplast and Mitochondria Gene Families AT2G30160 77.231 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01383 K15113 - qsa:O6P43_014101 576.63