Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g01372 | ATGGCGATGGGCTCTTCTTCTGGTAGCTTAGACACTTCTGGAAATTCTCATCCAAGTTTCGCTTTCTCTTCTCATCCTTTTATGACTGCTTCTTTCGCTGACCTTTTGGCTTCACCTGTTGAAGGAAACCCCACTAGTAGTGATAACAAACAACAACGCAGTGGTGGTTTGGGAGACCGTATAGCAGAGAGAATTGGGTCTGGCGTTCCAAAGTTTAAGTCAATCCCACCGCCCTCTTTGCCTATCTCTCCTCCTGCTTTTTCTCCTTCTTCATATTTTGCTATCCCAGCTGGGTTGAGTCCTGCTGACCTATTGGACTCACCTGTCCTTCTTAACTCTTCTAATATTCTGGTATCTCCAACTACTGGAGCATTTGCTGCTCAGTCCTTTAATTGGAAAAGCAGCAATTCTGGTGATAACCAGCAGAGTATTAAGCAAGAAGACAGAGGCTTCACAAGTTTCTCTTTTCAACCTCAACCAAGGCCACCACCTCCTTCATCAACTGCTGTGTTTCAATCTTCAGTCAACGCAAACCAAACTGGACAGCAACAAGCATGGAGTTTTCAAGAGGCTACCAAGCAAACCAGTTTTTCCTCGGGGAAGGGTATTGTTAAATCAGAAAACCCTTCTGGTCAGAGCTTTTCCCCTGAGATTGCTACCATACAGAACAATACACAAAGCAAGAACAATGGGATCCAACCAGGTTACAACAACTACCATCATCAACAACCTCAAGTTCTGAGCAGAAGGTCGGATGATGGGTACAACTGGAGAAAGTATGGTCAAAAACAAGTGAAAGGAAGTGAAAATCCAAGGAGTTATTACAAGTGCACATACCCCAGTTGCCCAACGAAGAAGAAAGTTGAGAGATCTTTAGATGGTCAGATAACTGAGATAGTTTACAAGGGTACTCATAACCATCCTAAGCCTCAGTCCATCAGAAGATCCTCATCCTCATCCAATTCTCTGCAAATGATACCATCAAACCCTGCTAGCAATGAAATCCCAGATCAATCATTTGTTACTCATGGATCTGGACAAATGGATTCTGTTGCAACAACTGAGAACTCATCAATATCCATGGGAGATGATGAATTTGACTCACAGAGAAGTAAATCTGTTGGCGATGAATTTGATGAGGATGAGCCTGATGCCAAAAGATGGAGAAAGGAGAGTGAAAATGAAGGAATTTCAGCTGCAGGGAGTAGAACAGTTAGAGAACCAAGAGTGGTAGTTCAAACAACTAGTGATATTGATATTTTGGATGATGGATATAGATGGAGAAAATATGGACAGAAAGTAGTCAAAGGAAATCCAAATCCGAGGAGTTATTACAAGTGCACATACCCTGGATGTCCTGTGAGAAAGCATGTCGAGAGAGCATCACACGACTTAAGAGCAGTGATTACTACCTACGAAGGAAAGCACAACCATGATGTGCCTGCAGCTCGCGGCAGTGGCAGCCATTCAGTGAATAGACCTATCCTTAACAATGGGAACAACAGCAGCAATACCAATAACAACAGCAACATCAGCACAGCCGCCGCCATGAGGCCTATCTCCATTGCCTATCAACCTAACAATTCAGTCAGTAACCCTGTCCAGAGTTATAGGCCACCCACAACATCAGAAGGGCAATCAGCATTTGGACTTGATATGCTGCCGAGTCCCGGCGGGAGCTTTGGATTCTCAGGGTTTGGGAATCAAATGGTTTCTTACACCAATCAGCAATCAGACAATGCATTCCCCCGAGCCAAAGATGAACCAAGGGATGACATGTTTCTTGAATCTTTGCTATGCTAA | 1803 | 0.4387 | MAMGSSSGSLDTSGNSHPSFAFSSHPFMTASFADLLASPVEGNPTSSDNKQQRSGGLGDRIAERIGSGVPKFKSIPPPSLPISPPAFSPSSYFAIPAGLSPADLLDSPVLLNSSNILVSPTTGAFAAQSFNWKSSNSGDNQQSIKQEDRGFTSFSFQPQPRPPPPSSTAVFQSSVNANQTGQQQAWSFQEATKQTSFSSGKGIVKSENPSGQSFSPEIATIQNNTQSKNNGIQPGYNNYHHQQPQVLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPSCPTKKKVERSLDGQITEIVYKGTHNHPKPQSIRRSSSSSNSLQMIPSNPASNEIPDQSFVTHGSGQMDSVATTENSSISMGDDEFDSQRSKSVGDEFDEDEPDAKRWRKESENEGISAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTYPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPILNNGNNSSNTNNNSNISTAAAMRPISIAYQPNNSVSNPVQSYRPPTTSEGQSAFGLDMLPSPGGSFGFSGFGNQMVSYTNQQSDNAFPRAKDEPRDDMFLESLLC* | 601 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g01372 | 600 | SMART | WRKY_cls | 421 | 480 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | SMART | WRKY_cls | 251 | 309 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | SUPERFAMILY | WRKY DNA-binding domain | 413 | 481 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 225 | 253 | - | - | |
Pte13g01372 | 600 | Pfam | WRKY DNA -binding domain | 252 | 308 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | Pfam | WRKY DNA -binding domain | 422 | 478 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 477 | 511 | - | - | |
Pte13g01372 | 600 | Gene3D | WRKY domain | 408 | 474 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | FunFam | WRKY transcription factor | 241 | 311 | - | - | |
Pte13g01372 | 600 | Gene3D | WRKY domain | 238 | 311 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 105 | 508 | IPR044810 | GO:0003700 | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 310 | 364 | - | - | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 301 | 401 | - | - | |
Pte13g01372 | 600 | SUPERFAMILY | WRKY DNA-binding domain | 250 | 310 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 490 | 511 | - | - | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 365 | 396 | - | - | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 38 | 80 | - | - | |
Pte13g01372 | 600 | ProSiteProfiles | WRKY domain profile. | 416 | 481 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 40 | 54 | - | - | |
Pte13g01372 | 600 | ProSiteProfiles | WRKY domain profile. | 252 | 310 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01372 | 600 | MobiDBLite | consensus disorder prediction | 225 | 250 | - | - | |
Pte13g01372 | 600 | FunFam | WRKY transcription factor 33 | 408 | 474 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g01372 | Pte-Chr13 | 23832521 | 23837068 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g01372 | 249 | 599 | WRKY Transcription Factor Family | AT2G38470 | 54.098 | 2.55e-108 | 333 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pte13g01372 | WRKY | 2.7e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g01372 | K13424 | - | qsa:O6P43_014117 | 811.601 |