Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01362 ATGCGATTGATACGATTTCAGAATCACAACTACCACCAATATTCACAAAGCCAGCTAAACTGGATGAAGCTCTCTCTGAATGCTCTGCACCCAGCTCGTATGCCTGTACCAGGAGAGAAAAACATCAGAATTCAAAGAGATCACAGAAGATTCGGTCCGCGAAAGTCCTCAGTTAGTTCTACAGGAATAAGACTAAGAACCAATTCTCCAAAGCTTGCGACGAGTAGGACAGTTCAAGGACATGCAAGAAAGAATATGGCATATAGTGCATGTAAAGCGGTCAAGAACAGCAACTTCCAAGACAGTTTTGCTGTAGTGAAGTCTTCAGTTGATCCAGAAAGAGACTTCAGAGATCCGATGATGGAAATGAGTATGGAAAATAATATTCAGGAATCATCAAAGGACTTGGAATACCTTCTAGCTTGTTACCGTTCATTGAACTCGAAAGATTATCACGATCTCATTGTCAAGTCATTTGAGCAAGTTTGGTTTGACATGGCTCACCTCAAACTGTAA 516 0.4109 MRLIRFQNHNYHQYSQSQLNWMKLSLNALHPARMPVPGEKNIRIQRDHRRFGPRKSSVSSTGIRLRTNSPKLATSRTVQGHARKNMAYSACKAVKNSNFQDSFAVVKSSVDPERDFRDPMMEMSMENNIQESSKDLEYLLACYRSLNSKDYHDLIVKSFEQVWFDMAHLKL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01362 171 ProSiteProfiles OVATE domain profile. 105 165 IPR006458 -
Pte13g01362 171 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 166 IPR038933 GO:0045892
Pte13g01362 171 Pfam Transcriptional repressor, ovate 109 166 IPR006458 -
Pte13g01362 171 NCBIfam uncharacterized plant-specific domain TIGR01568 103 166 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01362 Pte-Chr13 23455838 23459564 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte13g01362 Ovate 5.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01362 - - qsa:O6P43_014149 154.451