Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01360 ATGCCAGAGATCGAACATGTTGCAGACGAGGCCTTGTTCGGAAAATATGAGCTTGGCAGGCTTTTGGGTCGGGGCGCTTTTGCCAAAGTTCATCATGCCAGAAATACTGAGACAGGACAAAGTGTCGCCATTAAGATTATCAACAAGAAGAAGATCTCAACTTCAGGTCTCATGTCCAACGTGAAGCGTGAGATTGAGATTATGAGGCGTTTGCGCCATCCAAACATTGTGAGGCTTTCTGAAGTTCTGGCGACTAAGACGAAAATATTCTTCGTCCTGGAATATGTAAAGGGTGGTGAGCTCTTCCAAAAGGTGGCTAAAGCAAGGTTGAGTGAAGATCTAAGCCGGAGAATTTTCCAGCAATTGATTTCTGCTGTTGGGTATTGTCATCTGCGAGGCGTTTTCCACCGCGATTTGAAGCCTGAGAATCTTTTGCTCGACGAGAATGGGAATTTGAAAGTGACGGATTTTGGTCTTAGTGCTGTGACTGAGCAGATCCGACCCGACGGGTTGCTCCATACTTTATGCGGTACGCCGGCCTATGTTGCGCCGGAGATTTTGACGAAGAAAGGTTACGAGGGTGCTAAGGTTGATGTTTGGTCGTGTGGCGTGATCCTCTATGTGTTGAATGCTGGGTATCTTCCATTCAATGATCCAAACCTAATGGTGATGTATAAGAGGATATACAAAGGCGAGTATAGATGTCCCAGGTGGACGTCTCCTGAGCTCAAACACTTATTGTCCAGGCTATTGGATGCAAATCCAAATACAAGGATTATAGTGGATGAAATTCTCAAACATCCATGGTTTAGAAGAGGTGGAAATGAAATCAAATTCTACCATGAATTTGCAGAAGATGATTGTGAGCCTAAGGTTGGCGATAGTGGAACTGGGGAATCTTCAAACAGCAACTGCTTTAATGCGTTTGATATCATATCATTTTCGTCAGGATTGAATTTATCTCGTATGTTTGATGACTCATGTAATGCTGTTGAAGATTGTGAGCGATTCATCTTGTCCCAAACTGCAGCAAAGGTTTTTAATGAGTTGAACAAATTTGCTGTTGCTGAGAGGTTGAAGGTGAAGAAGTTTAAAGAACATAGAGTGGAGCTACAAGGAGAGACTGGAGATTTCAGAATTGGAGTTAAGGTGTACCCTTTGACCGATCGTTTGGTGGTTGTAGAAGCTAAGAGGAGAGGCAGTGATGCTGTGGCTTTCAAAGATATTTTGAAGAACAAGCTAAAGCCTTTCCTAACCGACCAACACTATCATCAGCAACAACAAATAGTCGCAGCAGCTGATCATTCTCAAGTTTCCAGTGATTGA 1326 0.4344 MPEIEHVADEALFGKYELGRLLGRGAFAKVHHARNTETGQSVAIKIINKKKISTSGLMSNVKREIEIMRRLRHPNIVRLSEVLATKTKIFFVLEYVKGGELFQKVAKARLSEDLSRRIFQQLISAVGYCHLRGVFHRDLKPENLLLDENGNLKVTDFGLSAVTEQIRPDGLLHTLCGTPAYVAPEILTKKGYEGAKVDVWSCGVILYVLNAGYLPFNDPNLMVMYKRIYKGEYRCPRWTSPELKHLLSRLLDANPNTRIIVDEILKHPWFRRGGNEIKFYHEFAEDDCEPKVGDSGTGESSNSNCFNAFDIISFSSGLNLSRMFDDSCNAVEDCERFILSQTAAKVFNELNKFAVAERLKVKKFKEHRVELQGETGDFRIGVKVYPLTDRLVVVEAKRRGSDAVAFKDILKNKLKPFLTDQHYHQQQQIVAAADHSQVSSD* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01360 441 Pfam NAF domain 304 363 IPR004041 GO:0007165
Pte13g01360 441 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Pte13g01360 441 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pte13g01360 441 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01360 441 Gene3D Kinase associated domain 1, KA1 305 423 - -
Pte13g01360 441 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01360 441 CDD CIPK_C 307 418 - -
Pte13g01360 441 Gene3D Transferase(Phosphotransferase) domain 1 7 304 - -
Pte13g01360 441 FunFam Non-specific serine/threonine protein kinase 7 95 - -
Pte13g01360 441 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01360 441 SUPERFAMILY Protein kinase-like (PK-like) 13 271 IPR011009 -
Pte13g01360 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Pte13g01360 441 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 399 - -
Pte13g01360 441 FunFam Non-specific serine/threonine protein kinase 6 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01360 Pte-Chr13 23447714 23449039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01360 1 415 CBL-interacting serine-threonine protein kinases AT2G30360 63.765 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte13g01360 Pkinase 2.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01360 - - qsa:O6P43_014145 581.637