LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g01354	ATGAAGATGTGCCTCATCGATTGCAGATCTGTCACTAAAAACCAGGAGTTCCCAGCTTGTGTAGAGTTTGAAGAGTCTGTGCATGATGGATCAGGATTGATCAAGCGTGAAATATCCGTTATGAGAAAAGTGAGACACCCCAATATCATACATCTTTATGAGGTATTGGCGACCAAGAAAAAGATTTACTTCGTCCTGGAATATGCTAAAGGTGGTGAGCTCTTTGACAAGGTAGCTAAAGGAAAACTCAAGGAGGATGTTGCGCATAAATATTTTCGGCAGCTGATCAATGCAGTCGACTATTGCCATAGTAGAGGTGTGTATCACCGAGATATTAAGCCTGAAAACCTGCTGCTTGATGAAAATGAAAATCTAAAGGTATCTGATTTTGGTTTAAGTGCCCTTGCTGAGTCCAAGCGCCAGGATGGGTTACTGCATACAACTTGTGGTACTCCTGCCTATGTTGCTCCTGAAGTTATCAACAGGAAAGGTTATGATGGTGCCAAAGCTGATATATGGTCTTGTGGTGTGGTTTTATATGTCTTAATAGCTGGATATCTGCCATTTCACGATTCAAATTTGATGGAGTTGTACAGGAAGATTGGGAAAGCTGAATTCAAATGCCCCCATTGGTTCCCGCGTGAAGTTCGTAGGCTATTGTGCAAGATATTAGATCCAAACCCCAGTACGAGGATTTCTATTGCCAAAATTAGAGAAAGTCCTTGGTTCAGGAAGGAAATGAAACTTGCAAACAGTGACGAGAAGTCTCCTTCAGATGCAAAAGGTTCAGAGCAAAATGGGAGCAGTAGTGGTGCTTCAAATAGCGAGACAATTCAAGAGCCTGTCAGACTATCGAGATTGAATGCTTTCGATATTATCTCTCTCTCCCCTGGTTTTAACCTCTCAGGCTTTTTTGAAGATCATTTTGGAAAGAAAGAAGCAAGATTTACTTCGATGCAACCTGCATCAACCATCATCTCAAATCTGGAAGACATAGCTAAGCGTTTAAGGCTGAAAATAAACAAAAGGGAAGGGGGTTTACTGATACTGGAAGCATTGAAGGAAGGGAGGAAGGGGATATTGTCCATTGATGCTGAGATCTTTGAGGTCACTCCACTTTTTCATTTTGTGGAAGTGAAGAAATCAAGTGGAGATACAATGGAATATCAAAAAATATTGAAAGATGATATAAGACCTGCCCTTCAGGATATTGTTTGGGTTTGGCAGGATGAGCCACAACATGATAAAATTCCACCAGCTCAATTCAACGAGCATAATCCACAGCAAAGTAGGTCAATGAGTAGTTGCAGCCACAGCAGCAGCAGCTCCTCATGA	1335	0.4157	MKMCLIDCRSVTKNQEFPACVEFEESVHDGSGLIKREISVMRKVRHPNIIHLYEVLATKKKIYFVLEYAKGGELFDKVAKGKLKEDVAHKYFRQLINAVDYCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLYVLIAGYLPFHDSNLMELYRKIGKAEFKCPHWFPREVRRLLCKILDPNPSTRISIAKIRESPWFRKEMKLANSDEKSPSDAKGSEQNGSSSGASNSETIQEPVRLSRLNAFDIISLSPGFNLSGFFEDHFGKKEARFTSMQPASTIISNLEDIAKRLRLKINKREGGLLILEALKEGRKGILSIDAEIFEVTPLFHFVEVKKSSGDTMEYQKILKDDIRPALQDIVWVWQDEPQHDKIPPAQFNEHNPQQSRSMSSCSHSSSSSS*	445

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g01354	444	ProSiteProfiles	NAF domain profile.	282	306	IPR018451	GO:0007165
	Pte13g01354	444	Gene3D	Phosphorylase Kinase; domain 1	6	73	-	-
	Pte13g01354	444	FunFam	Non-specific serine/threonine protein kinase	69	250	-	-
	Pte13g01354	444	Gene3D	Transferase(Phosphotransferase) domain 1	74	250	-	-
	Pte13g01354	444	Pfam	Protein kinase domain	33	243	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g01354	444	MobiDBLite	consensus disorder prediction	261	278	-	-
	Pte13g01354	444	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	107	119	IPR008271	GO:0004672\|GO:0006468
	Pte13g01354	444	MobiDBLite	consensus disorder prediction	415	444	-	-
	Pte13g01354	444	MobiDBLite	consensus disorder prediction	250	278	-	-
	Pte13g01354	444	Pfam	NAF domain	286	342	IPR004041	GO:0007165
	Pte13g01354	444	FunFam	Non-specific serine/threonine protein kinase	283	406	-	-
	Pte13g01354	444	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	34	401	-	-
	Pte13g01354	444	Gene3D	Kinase associated domain 1, KA1	283	407	-	-
	Pte13g01354	444	CDD	CIPK_C	288	402	-	-
	Pte13g01354	444	SUPERFAMILY	Protein kinase-like (PK-like)	32	244	IPR011009	-
	Pte13g01354	444	SMART	serkin_6	21	243	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g01354	444	MobiDBLite	consensus disorder prediction	422	444	-	-
	Pte13g01354	444	ProSiteProfiles	Protein kinase domain profile.	1	243	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte13g01354	Pte-Chr13	23414966	23418224	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte13g01354	9	411	CBL-interacting serine-threonine protein kinases	AT5G58380	66.667	0.0	559

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Pte13g01354		Pkinase	2e-64	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g01354	-		K07198	qsa:O6P43_020433	582.022