Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01350 ATGCATCAAGATCCATCATCTTCTTCGAACCCTAACACTATTAACGTCAATGGCAATACCAATGTGAATATGGATTCTTCTCACGCAACCCAACTCCCACCAGTTGCAAATGCATCACCTCCTTCTACTACTGCTTCTTCATCTTCCACTTCCATTTACATCAGAAATGGCGCCAGTGATGGCAATGCTATTATTGGCGGGTCCCAAGCCCACAACAATCAACCCCACAACAACCACAGGAGGGCTCACTCGGAGGTTAGTTTCAGAATGCCCGATGATTTGATGGATCTGTTGCCGTCCGATCCGTTTAATGGAGGTGGATCATCCACGGCGAGTTTTGAGGAGATTGGATCGGAAGATGACCTGTTTTCTACATACATCGATGTTGACAAGCTCGGAGGAGTAGTAGGACCGAATGGGTCGTCGGATCAGAGTGGAAACGGTCATGCTAATAGCACTGCTGACGGAGATAAGAGTTCGGATCAGAGTCCGAGTACTAGTGCCAATGCAAGGCCCAGGCACCGACATAGCTACTCGGTTGATGGGTTGACATCCAACAGTATGTTCGGTGAAATTATGGAAGCAAAGAAGGCAATGCCGCCTGACAAGTTAGCTGAGCTTTGGACCATCGATCCCAAGCGAGCTAAGAGAATACTGGCAAATCGACAGTCAGCTTCTCGGTCCAAAGAGAGAAAGGCTCGTTACATACAAGAACTTGAGCGCAAAGTCCATACTCTCCAGACTGAAGCTACTACCCTTTCTGCCCAACTCACACTGTTCCAGAGGGATACCTCAGGTTTGAGTAATGAAAACACAGAGCTTAAGCTTCGATTGCAAGCTATGGAGCAACAAGCTCAACTTCGTGATGCACTGAATGAGGCACTGAAAAACGAAGTTGAGAGACTCAAACTTGCGACAGGAGATATGATGAATCCTTCTGAATCCTTTAATATGGGAATGCCCCAGATGCCATTTCCAGGACCAAATTTCTTCCCTCTACAACCCCATGCTGGAGTTCCTGGTCAACGGAACATGCAAATGCCACCATTCAGTCATTCCCAAAACATGGCAGCTCACCAAATGCATCAAAGTTCTTATTCCCTTCCAGATATAATGCAGAATGACCAACTTAGTCGTTTACAGGGGCTTGATATTAGTAGCAACGGATCACCTCTTGTGAAGTCCGAGGCCCCTTCGCTTTCAGCAAGTGAGAGCAGCACCACATTCTGA 1230 0.4707 MHQDPSSSSNPNTINVNGNTNVNMDSSHATQLPPVANASPPSTTASSSSTSIYIRNGASDGNAIIGGSQAHNNQPHNNHRRAHSEVSFRMPDDLMDLLPSDPFNGGGSSTASFEEIGSEDDLFSTYIDVDKLGGVVGPNGSSDQSGNGHANSTADGDKSSDQSPSTSANARPRHRHSYSVDGLTSNSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSASRSKERKARYIQELERKVHTLQTEATTLSAQLTLFQRDTSGLSNENTELKLRLQAMEQQAQLRDALNEALKNEVERLKLATGDMMNPSESFNMGMPQMPFPGPNFFPLQPHAGVPGQRNMQMPPFSHSQNMAAHQMHQSSYSLPDIMQNDQLSRLQGLDISSNGSPLVKSEAPSLSASESSTTF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01350 409 Coils Coil 229 256 - -
Pte13g01350 409 Pfam bZIP transcription factor 213 267 IPR004827 GO:0003700|GO:0006355
Pte13g01350 409 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 30 376 - -
Pte13g01350 409 MobiDBLite consensus disorder prediction 1 113 - -
Pte13g01350 409 SUPERFAMILY Leucine zipper domain 213 264 IPR046347 GO:0003700|GO:0006355
Pte13g01350 409 MobiDBLite consensus disorder prediction 346 364 - -
Pte13g01350 409 MobiDBLite consensus disorder prediction 334 364 - -
Pte13g01350 409 MobiDBLite consensus disorder prediction 134 183 - -
Pte13g01350 409 FunFam probable transcription factor PosF21 212 265 - -
Pte13g01350 409 Gene3D - 213 264 - -
Pte13g01350 409 Coils Coil 264 301 - -
Pte13g01350 409 MobiDBLite consensus disorder prediction 382 409 - -
Pte13g01350 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 211 274 IPR004827 GO:0003700|GO:0006355
Pte13g01350 409 SMART brlzneu 209 273 IPR004827 GO:0003700|GO:0006355
Pte13g01350 409 MobiDBLite consensus disorder prediction 1 75 - -
Pte13g01350 409 CDD bZIP_plant_RF2 214 263 IPR044759 GO:0003700|GO:0006355
Pte13g01350 409 MobiDBLite consensus disorder prediction 138 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01350 Pte-Chr13 23301159 23304319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01350 79 410 bZIP Transcription Factor Family AT2G40620 53.073 4.39e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte13g01350 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01350 - - gmx:100790732 456.062