LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g01325	ATGGGTGCAGATAAAAACAATATCGAAATGGAGGAAGGAACTTTAGAGATCGGGATGGAGTACAGAACTGTATCTGGAGTTGCGGGACCATTGGTTATCCTTGATAAAGTCAAGGGACCTAAATACCAAGAAATCGTAAATATCCGCCTGGGAGATGGAACCACCCGCCGTGGTCAGGTCCTGGAAGTTGATGGAGAAAAGGCTGTTGTTCAGGTGTTTGAAGGAACGTCTGGAATCGACAACAAATTCACAACTGTACAATTTACTGGAGAGGTTCTGAAGACTCCTGTGTCATTGGACATGCTTGGCCGCATTTTCAATGGTTCTGGAAAGCCAATTGACAATGGTCCTCCTATTTTGCCAGAGGCTTATTTGGATATTTCAGGGAGTTCTATCAATCCTAGTGAGAGAACCTATCCTGAGGAGATGATACAGACAGGAATTTCAACCATTGATGTTATGAATTCTATTGCTAGAGGACAAAAGATCCCTCTTTTCTCTGCTGCTGGTCTTCCCCACAATGAAATTGCGGCACAAATATGTCGTCAAGCGGGTTTGGTGAAGAGATTGGAGAAGACTGAAAATCTTCTTGGGGAGGAGGATAACTTTGCTATTGTCTTTGCTGCTATGGGTGTAAATATGGAGACTGCTCAATTTTTCAAGCGCGATTTTGAGGAGAATGGTTCTATGGAAAGAGTGACCCTGTTTCTTAATCTGGCAAATGACCCCACAATTGAACGTATTATCACACCTCGTATTGCTCTTACCACTGCTGAATATTTGGCATATGAATGTGGGAAGCATGTTCTTGTGATCCTCACCGACATGAGTTCCTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCAGGAAGACGTGGATATCCTGGGTACATGTATACTGACCTGGCAACAATCTATGAGCGTGCTGGAAGAATTGAAGGGAGGAAAGGGTCCATCACACAGATTCCTATTCTAACTATGCCAAATGATGACATTACACATCCTACCCCTGATCTCACTGGGTATATCACTGAGGGGCAGATATACATTGACCGTCAGCTACACAACAGACAGATATATCCTCCAATCAATGTCCTTCCATCACTATCTCGTCTAATGAAGAGTGCTATTGGTGAGGGAATGACTCGCAGGGATCATTCTGATGTGTCCAATCAGCTTTATGCAAACTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCTGTCGTCGGAGAAGAAGCCCTTTCATCGGAGGATCTGTTGTATCTTGAATTCTTGGACAAGTTTGAGAGGAAGTTTGTCACACAAGGTGCTTATGATACCCGTAACATTTTTCAGTCTCTTGACCTAGCGTGGACTTTGCTGCGCATTTTCCCGCGTGAGCTTCTCCACCGTATACCTGCAAAGACTCTTGATCAATTTTATAGCAGAGACGCAGCCAATTGA	1461	0.4422	MGADKNNIEMEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTENLLGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDAAN*	487

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g01325	486	CDD	ATP-synt_V_A-type_beta_N	20	91	-	-
	Pte13g01325	486	Gene3D	-	29	486	-	-
	Pte13g01325	486	CDD	ATP-synt_V_A-type_beta_C	385	479	-	-
	Pte13g01325	486	PIRSF	V-ATPsynth_beta/V-ATPase_B	11	486	IPR022879	-
	Pte13g01325	486	ProSitePatterns	ATP synthase alpha and beta subunits signature.	366	375	IPR020003	GO:0005524
	Pte13g01325	486	Pfam	ATP synthase alpha/beta family, beta-barrel domain	24	90	IPR004100	GO:0046034\|GO:1902600
	Pte13g01325	486	FunFam	V-type proton ATPase subunit B, brain	29	486	-	-
	Pte13g01325	486	PANTHER	V-TYPE PROTON ATPASE SUBUNIT B	4	484	IPR022879	-
	Pte13g01325	486	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	94	381	IPR027417	-
	Pte13g01325	486	Pfam	ATP synthase alpha/beta family, nucleotide-binding domain	147	375	IPR000194	GO:0005524

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte13g01325	Pte-Chr13	22902218	22908876	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte13g01325	1	487	Primary Pumps ATPases(2)	AT4G38510	96.933	0.0	966

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g01325	K02147		-	han:110941202	940.643

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