LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g01320	ATGTCGCTTGCTCTACTAGCTTCTCAAACACTGCCAGGACTCGTAGCATACTTTGTTCTGTCATTGCTACTGCTTATGGTCATGCCCTTATGTTATCTATACCTCAATGGAGTACTGCACCAAACTAGTCGAGGCATTGGGCAACGTAAGAAGAAGCAACTCCCTCCTGGCCCTAAACCTTGGCCTATAGTAGGCAATCTACCAGAAATGTTCATAAACAAGCCTAACTTCCGTTGGATACATAATATGATGAAGCATATGAAATCCGACATTATTTGTATTCGCTTAGGTAATTTCTATGTGATTCCTGTCACTTGTCCAATAATCAGCAGAGAACTCTTCAGAAAGCAGGATGCTGTTTTTCAATCAAGGCCAATGTGCATGGCTGCAACCCTTTTGTCCAGTGGATATTCAACAACGGTGGTTGTTCCATTTGGAGATCAGTGGAAGAAGATGAGGAGGGTCATCACCAACGAGTTGATGTCACCACAAAAAACCCGGTGGCTTCTTGGCAAAAGAATTGAGGAGGCGGATCACCTCGTTCGCTATGTCTTCAGCCACTGCCGCAACGAGGAAGCTGGTAACAATGGTGGTGCCGTAAACTTGAGAACAGTTGCTCGGCATTTCAGCGGCAACGTAATCAAACAGACTATTTTCAGTAGGAGGCATTTTGGTGAGGGAACGAAAGATGGAGGACCAGGATTCGAGGATGAAGAACACATGGAGGCCCTATTTGCAATTTTAAAGTACGTATATGCCTTTTCCATTTCTGATTACTTGCCTTGCTTGAAAGGGCTCGACTTGGATGGTCACCAGAAGAGCACGAGGAAGGCTGTTGAGACAGTGGATAAGTACCATAACCCAATCATCCACGAGAGAATTCAACAATGGGGGGATGGTGGAAGAAAGGAAGTAGAGGACTGGCTTGACGTGCTTATTACTTTGAAAGATGAGAATGGCAAACTCTTGCTGACGCAAGAAGAAATCATCGCTCAAATTAGGGAATTAACGGCTGCAGCAGTGGATAATCCTTCAAATGCGATGGAATGGGCCCTTGCGGAAATGCTTAACCAACCTGAACTGTTCGAAAAGGCAACAGAAGAATTGGACAGAGTCGTTGGCAAAGACAGGCTTGTTCAGGAATCAGATTTTCCAAAACTCTTCTATGTTAAGGCTTTAGCTCGAGAGGCTTTCCGCAGGCATCCTATAGTGCCATTCAATCTGCCCCATGTTGCCCTCTCTGACACCACTGTGGCCAGCTACTACATTCCAAAGGGCAGCCATGTCTATCTCAGCCGAATGGGACTTGGTCGCAACCCCAATGCTTGGGATGAGCCGGATAAGTTCAAACCGGAGCGGCACATGAAGGATGATGGATCTGATATCCTTCTATCTGACGCTGATTTTCGAATTCTGTCATTCAGTGCGGGAAGACGAGGTTGCCCTGCTGTAAATTTAGGGAGTGCAATGACCATCATGCTCTTTGCGAGGCTTCTGCATGCATTTGATTGGAGTCTACCTCCAGGTCAATCAAGCGTGGATCTTAATGAAGGCGAGGATGACATCTTTCTTGCTAAACCGCTGATTGCACTCGCAAAGCCTAGGTTAGCAGCGGATGCATACCTTGTTTGA	1632	0.4614	MSLALLASQTLPGLVAYFVLSLLLLMVMPLCYLYLNGVLHQTSRGIGQRKKKQLPPGPKPWPIVGNLPEMFINKPNFRWIHNMMKHMKSDIICIRLGNFYVIPVTCPIISRELFRKQDAVFQSRPMCMAATLLSSGYSTTVVVPFGDQWKKMRRVITNELMSPQKTRWLLGKRIEEADHLVRYVFSHCRNEEAGNNGGAVNLRTVARHFSGNVIKQTIFSRRHFGEGTKDGGPGFEDEEHMEALFAILKYVYAFSISDYLPCLKGLDLDGHQKSTRKAVETVDKYHNPIIHERIQQWGDGGRKEVEDWLDVLITLKDENGKLLLTQEEIIAQIRELTAAAVDNPSNAMEWALAEMLNQPELFEKATEELDRVVGKDRLVQESDFPKLFYVKALAREAFRRHPIVPFNLPHVALSDTTVASYYIPKGSHVYLSRMGLGRNPNAWDEPDKFKPERHMKDDGSDILLSDADFRILSFSAGRRGCPAVNLGSAMTIMLFARLLHAFDWSLPPGQSSVDLNEGEDDIFLAKPLIALAKPRLAADAYLV*	544

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g01320	543	Gene3D	Cytochrome P450	43	525	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte13g01320	543	Pfam	Cytochrome P450	55	527	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte13g01320	543	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	474	483	IPR017972	GO:0005506\|GO:0016705
	Pte13g01320	543	PRINTS	E-class P450 group I signature	481	504	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte13g01320	543	PRINTS	E-class P450 group I signature	391	409	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte13g01320	543	PRINTS	E-class P450 group I signature	328	345	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte13g01320	543	PRINTS	E-class P450 group I signature	471	481	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte13g01320	543	PRINTS	E-class P450 group I signature	209	227	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte13g01320	543	PRINTS	E-class P450 group I signature	109	130	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte13g01320	543	PRINTS	E-class P450 group I signature	432	456	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte13g01320	Pte-Chr13	22832799	22834758	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte13g01320	6	541	Cytochrome P450	AT2G22330	51.948	0.0	587

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g01320	-		-	gmx:100809902	655.981

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