Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01313 ATGAGGGAATTCAAGACTGCAGCATTTATATGCATAGTGTGGTGGGGATGGTGGACTGTGGTTGCAGACCCACAGAAAAATCTATTGAACAGTGGGTGCAGTCAGTACAAAGTAACCAACCTATCCAGCTTCTATGGCAATCTGAATTCTACTTTTTCTGACCTCAAATCTCAGCTAGGCGATGATGACAAGCACTTTGCCACAGCACAAGGAGTCCGGGGTGCCAGCCCTGTATATGCTCTATTTGAATGCAGGAAGTACCTGTCTACGGTTGACTGCTTAGCTTGCTTCGCCGCTGCCACATCCCAAATCCGCAATTGCTCTGCCGCTAACGGGGGCCGTGTCATCTATGATGGTTGCTTCCTCAGGTATGAGAGCAATAATTTCTTCGACCAGACCACATTGCCTGGAAATAGCATGGTTTGTGGGAACCATTCTGCACTTGAAGCCACTGCTTTTACCACAGCTGCAGCACAATTCCTGACAGATCTCCAAGTAGCAACACCCAGAATCAATGGTTTTTTTGCAGCTACCATGAAACAAGTGGCTCCTGGCAGCACTGACCGAATTTATGCTATAGCTCAATGTGCTGAAACTGTTAGTGAGAGTGGTTGTCAAAATTGCTTGACAGTAGGGTATAACAACATACAGAGCTGTCTTCCTAACACAGATGGAAGAGCCTTTGATGCTGGCTGTTTCATGAGGTATTCCACGACACCCTTTTTCGCAGATAATCAGACAGTGGATATCACACCCTTTCTGAAATCAGGTTCAAGCAAAAAGAAGGCAGCTATTCTAGGTGGAGTAGTTGGAGGTGTAGCCTTTGTTTTGCTCCTCCTAGCAGTTATTGGATGGTTTAAACTGTCAAGAAGACGCAAGAGAACGTCCAGAGGTGATATCTTGGGAGCTACTGAGTTGCAAGGTCCAGTCAAATACAGATACAAAGACTTGAAATCAGCAACAAAAAGTTTCAGTGAGGAAAATAAACTAGGAGAGGGAGGTTTCGGTGATGTTTACAAGGGTACTCTCAGAAACGGTAACATAGTTGCTGTCAAGAAACTAATTTTAGGCCAATCCACCAAGGTAGAGGAGAACTTCCAAAGTGAGGTCAAGATTATTAGCAATGTGCATCACCGAAATCTCACACGCCTGCTTGGATGTTGTAGTAAAGGGCCGGAACGAATCCTTGTCTTTGAATACATGGCAAATGGCAGCCTTGACAAGTATTTGTTTGGTGAACAGCGAGGCTCTCTTAATTGGAAACAAAGATATGATATCATTCTTGGCACAGCTAAAGGCCTTGCTTATCTGCATGAAGAATACCATGTGCGAATCATACATAGAGATATCAAACCAAGCAATATTCTTCTCGATGATGATCTTCAGCCTAGAATTGCTGATTTTGGACTGGCAAGGCTGTTACCTGAGGATCAGACTCATGTAAGCACCAGATTTGCTGGAACATTAGGGTATACAGCACCTGAGTATGCCATACATGGCCAGTTATCAGAGAAGGCTGACACCTACAGCTATGGTGTGGTAGTCCTAGAAATATTGAGTGGCAAACGAAGCAACGCAGTCAGGGACGACGTTGACGGTGGCTACCTTCTTCAACAAGCGTGGAAACTGTATGAAAGTGGGAAGCACTTAGAGTTGGTGGATGAAACCTTAGACTCAAATGAATATGACTCAGAAGAAGTGAAGAATATCATCGAGATTGCTCTTATGTGCACTCAATCATCGGTTGCTATGAGGCCTACTATGTCTGAAGTTGTTGTCCTGCTCAGAGTCAAAGGTTCAATGGAGGCCACCCGACCAACCATGCCTGTCCTTGCGGATTCAAATTTTAGGTACCGGGCCGATACGACTACCTCTACTGGCTCTTCCACATCCAATGCTACTGCGTCCATCTCCCATATCTCAGCTCGCTAG 1932 0.4513 MREFKTAAFICIVWWGWWTVVADPQKNLLNSGCSQYKVTNLSSFYGNLNSTFSDLKSQLGDDDKHFATAQGVRGASPVYALFECRKYLSTVDCLACFAAATSQIRNCSAANGGRVIYDGCFLRYESNNFFDQTTLPGNSMVCGNHSALEATAFTTAAAQFLTDLQVATPRINGFFAATMKQVAPGSTDRIYAIAQCAETVSESGCQNCLTVGYNNIQSCLPNTDGRAFDAGCFMRYSTTPFFADNQTVDITPFLKSGSSKKKAAILGGVVGGVAFVLLLLAVIGWFKLSRRRKRTSRGDILGATELQGPVKYRYKDLKSATKSFSEENKLGEGGFGDVYKGTLRNGNIVAVKKLILGQSTKVEENFQSEVKIISNVHHRNLTRLLGCCSKGPERILVFEYMANGSLDKYLFGEQRGSLNWKQRYDIILGTAKGLAYLHEEYHVRIIHRDIKPSNILLDDDLQPRIADFGLARLLPEDQTHVSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGVVVLEILSGKRSNAVRDDVDGGYLLQQAWKLYESGKHLELVDETLDSNEYDSEEVKNIIEIALMCTQSSVAMRPTMSEVVVLLRVKGSMEATRPTMPVLADSNFRYRADTTTSTGSSTSNATASISHISAR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01313 643 Pfam Protein kinase domain 325 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01313 643 CDD STKc_IRAK 330 592 - -
Pte13g01313 643 Gene3D - 138 241 IPR038408 -
Pte13g01313 643 Gene3D - 25 129 IPR038408 -
Pte13g01313 643 FunFam Cysteine-rich receptor-like protein kinase 2 25 129 - -
Pte13g01313 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Pte13g01313 643 ProSiteProfiles Gnk2-homologous domain profile. 135 241 IPR002902 -
Pte13g01313 643 Gene3D Phosphorylase Kinase; domain 1 287 400 - -
Pte13g01313 643 FunFam Cysteine-rich receptor-like protein kinase 2 137 241 - -
Pte13g01313 643 FunFam Cysteine-rich receptor-like protein kinase 2 401 603 - -
Pte13g01313 643 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Pte13g01313 643 ProSiteProfiles Protein kinase domain profile. 324 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01313 643 FunFam Cysteine-rich receptor-like protein kinase 2 289 400 - -
Pte13g01313 643 Pfam Salt stress response/antifungal 33 126 IPR002902 -
Pte13g01313 643 Pfam Salt stress response/antifungal 148 238 IPR002902 -
Pte13g01313 643 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pte13g01313 643 SUPERFAMILY Protein kinase-like (PK-like) 305 595 IPR011009 -
Pte13g01313 643 SMART serkin_6 324 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01313 643 MobiDBLite consensus disorder prediction 621 643 - -
Pte13g01313 643 Gene3D Transferase(Phosphotransferase) domain 1 401 608 - -
Pte13g01313 643 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 79 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01313 Pte-Chr13 22545092 22550567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01313 20 644 Receptor kinase-like Gene Family AT1G70520 35.601 2.83e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte13g01313 Pkinase 7.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01313 - - qsa:O6P43_014208 893.649