Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01307 ATGATGATACTTGAAAGATCCCAGTTGGGTTTGGCACAAGCTTGGCAAAGAAATAAGAGGGCTGAGTCGCAGTTCTCATCTGGCGATCAAGATGGTTCCCGCCAAGGTCTTGAGCTCGTCTCCATCACTTCAGCCAGCTACGGTGATGTGGTCGCACGCCGTCCCCGAGGTCGACCATCCAAATCAAAAAAGGAACCCAAACCACCGGTCATAATAACAAGAGAGAGCCCCAACACCCTCAGAGCTCATATTCTTGAAGTGGGCAATGGATGCGATGTCTTTGACTGCGTGGCTACCTATGCCAAGCGTCAGCAACGTGGGATCTGCATCCTCAGCGACAGTGGTACAGTCACTAACATTAGCTTGAGGCAGCCGTCTGTCAAGCATGAGAAGTACCATATGAAAACTCTCTATTTTCCTAAAGCTCTCAAACTTGAGCTTTACGTTGCTCTCTGTTTTCCTCAAAGCTACTGCACAACAATAGTTTCAAACATAGTTGTGGAGAAAACATAG 513 0.4776 MMILERSQLGLAQAWQRNKRAESQFSSGDQDGSRQGLELVSITSASYGDVVARRPRGRPSKSKKEPKPPVIITRESPNTLRAHILEVGNGCDVFDCVATYAKRQQRGICILSDSGTVTNISLRQPSVKHEKYHMKTLYFPKALKLELYVALCFPQSYCTTIVSNIVVEKT* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01307 170 ProSiteProfiles PPC domain profile profile. 77 170 IPR005175 -
Pte13g01307 170 MobiDBLite consensus disorder prediction 50 71 - -
Pte13g01307 170 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 125 IPR005175 -
Pte13g01307 170 SUPERFAMILY AF0104/ALDC/Ptd012-like 73 137 - -
Pte13g01307 170 CDD DUF296 81 137 IPR005175 -
Pte13g01307 170 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 126 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01307 Pte-Chr13 22245775 22246547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01307 51 127 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 74.026 8.78e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01307 - - csin:114283409 143.665