Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01297 ATGCCCTTGGAAGGGAGCTTCAATATTGAGTCCACCACAAACACTTCCCCTCCTGATCTCTCTCTTCACATTAGTCCTCCCAACAATAATACATGTTCTTCAGCTCAACAAGGTATCAAAAGTGCTATTATCGGTCAAGCTCACACTGAGCTCTCTCTAGGGAGGAGGAGTACTCTCACTTGCGGAGGTGAAGAAACCCAGGCATACAAGAGAAACATCATCAACAGCAACAACTCGTTTTATAACCACCAACAAAGTCATGTGTTTCAATCTCAACAACATCGTCTTTATCACTCAAACAACAGTGCTGCTCCTCCTCTGGACCATATAAACCATGGAGTTTCATTTCTAGATGCATCATCATCAACAGCAGCAGCAACACAGAGCTGCTTGAGACCGATTAAAGGTATTCCAATCTATCAGAACCGGTCGTTTCCTTTCTTGCCTGTGGACCATACAAGAGAAAGCAAGGAAGCCAAGATGTGTAGCTTGTATCATCATGCTATGTCACCATACCCTTCTTTGTCGTCTTCTTGTTCCTCCTTGTGCTCTCCTGTGTCACCTCCAACTCCTCCACCGTGCTTCCCAGCTAGTTTGGATTCCATGTCGTCAACCTTAAACACAAGCTCGAATAATGTATCACCAATAGGTCTTAGAACGTCAGCTGGGGCTACAATAGAAGCAGCAAGGTTTAATGGTTTTCCACCTGATGCTTTCAAATCTCACCAATTGCACCATCATAATCAATACGGGTTTGGTCCCCCTGATGTTTCATCTGGGTTAATGAGATCAAGATTTTTGCCTAAACTTCCGACGAAGCGAAGCATGAGGGCACCGAGAATGCGGTGGACTAGTACGCTCCATGCTCGATTTGTTCGTGCTGTTGAGCTTCTTGGTGGTCATGAAAGAGCAACACCAAAGTCAGTTCTAGAGCTGATGGATGTGAAGGATCTCACACTGGCCCATGTCAAAAGCCATTTACAGATGTATAGAACTGTGAAGACAACTGACAGACCCGCAGCTTCTTCAGGCCATTCTGATGGATCAGGTGGAGAAGATGAAATATCCCCAATAGGAAACGCTTTTGATCACCGTGGACTCCAGTATACAGATCAAAGAGGACCTCCTGATCGCTTGTTGCAACAAGACGTGATGGAGAGTTCGAATCCTAGCTCTACTCTCTGGATTAACTCCTCAAGTAGCAGGGAAGGGTGGCAGCAGACGACTTGTAACGAAGCAGATGATCTTATGCCACTTAACCTGCCGACACAACAAGCACCTGGAGGGAACCAAATACAGGCAGAGTGTTTATAG 1314 0.4566 MPLEGSFNIESTTNTSPPDLSLHISPPNNNTCSSAQQGIKSAIIGQAHTELSLGRRSTLTCGGEETQAYKRNIINSNNSFYNHQQSHVFQSQQHRLYHSNNSAAPPLDHINHGVSFLDASSSTAAATQSCLRPIKGIPIYQNRSFPFLPVDHTRESKEAKMCSLYHHAMSPYPSLSSSCSSLCSPVSPPTPPPCFPASLDSMSSTLNTSSNNVSPIGLRTSAGATIEAARFNGFPPDAFKSHQLHHHNQYGFGPPDVSSGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVRAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRPAASSGHSDGSGGEDEISPIGNAFDHRGLQYTDQRGPPDRLLQQDVMESSNPSSTLWINSSSSREGWQQTTCNEADDLMPLNLPTQQAPGGNQIQAECL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01297 437 FunFam Myb family transcription factor 277 335 - -
Pte13g01297 437 MobiDBLite consensus disorder prediction 333 406 - -
Pte13g01297 437 MobiDBLite consensus disorder prediction 382 406 - -
Pte13g01297 437 Pfam Myb-like DNA-binding domain 280 331 IPR001005 -
Pte13g01297 437 MobiDBLite consensus disorder prediction 1 27 - -
Pte13g01297 437 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 412 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pte13g01297 437 NCBIfam myb-like DNA-binding domain, SHAQKYF class 279 332 IPR006447 GO:0003677
Pte13g01297 437 Gene3D - 278 335 - -
Pte13g01297 437 SUPERFAMILY Homeodomain-like 276 332 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01297 Pte-Chr13 22021555 22026206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01297 132 405 G2-like Transcription Factor Family AT5G16560 47.203 5.97e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte13g01297 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01297 - - gmx:100813413 372.859