Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01292 ATGAAAGAAAAAAGTCATCTGGGTTCTGACGATTTTTACTTGTGCATAGTTGGATTTTGTTCTTTGTTCGTCCGCGTTATCTCCCAAGCAAACCCGAGTGCTGATGCCCCTGCAATGTTGGCACTGAAAACCAGCCTTGGAGTCCCGGATACATTTGGTTGGTCTGATCCTGACCCTTGCAAGTGGACCAACGTTATTTGCTCCAGTGACAAGCGTGTAACTTCGATCCAAATCAAGGACAAGAGCCTCAAAGGTACGCTCACCCCAAGTCTGCAGAACCTCACTCAGTTACAACACTTAGAGGTTCAAGGGAACCAAATTTCAGGCCCTTTTCCTAGTTTGAAAGAGTTGAGTTCATTGCAACTTGTTTGGTTGAGTAACAATCAGTTTAGCTTTTTTCCAAGTGACTTTTTCACTGGATTGTCTTCACTTCAATCGATTATGTTGGATGCAAATCCTTTCTCACCTTGGGAGATCCCTGAAAGTCTTAGAAACGCCACGGCGCTTCAGGACTTCTCAGCAAACTCAGCAAACATCGCTGGAAAAATTCCAGATTTTTTTGGTTCAGATGTGTTTCCTAGTCTCAGCAAAGTGCACTTATCGTTTAATAATCTTTCTGGTGGACTGCCGAAGAGCTTTTCTGGGTCGCAGATGAAGTCTTTGTGGGTTAATGGGCAACGTGGGATCAAGCTTTCTGGGGAAATTGATGTTATACAGAATATGACTTCCTTGATAGAACTATGGTTGCATTCAAATGCGTTCTCGGGTCCGTTGCCAGATTTTTCTGGGTTGCAGAGTCTGGAGCAATTGAGTGTAAGGGATAATATGCTTTCTGGGCCGGTTCCACGTTCACTGGTGGATCTTAAATCACTTAAAGTCGTGAACTTGACGAATAATTTGCTTCAAGGTCCTGTGCCAGAGTTCAGAGCTAGTGTTGATGTTGATATGAGTAAGGGTTCTAATAGATTTTGCTTATTTAGTCCTGGTGACTGTGATTCCCGTATTAATATACTCCTCTCCATTGTGGAATCCATGCATTATCCTCAACATTTTGCAGACAATTGGAAGGGCAATGATCCTTGTAACAACAATTGGATACACATTTCATGTACTAATGATGGAAACATTAACAGTGTGGATTTCCGGAAATTGGGTCTCGCGGGTACCATATCTCCTGATTTTGCATCACTAAAATCATTGCAAAGATTGTTACTTTCTGACAATAATCTCACCGGAACAATTCCAGGTGTACTTACTAGCCTGTCAGTGCTTACTGAACTCGATGTGTCAAACAATCAGCTTTATGGACCGGTTCCATCCTTCAAGACTACTGTGAAGGTGAACACCCAAGGTAACATGAATATTGGGAAGGATGGGCCTAGTCCATCTCCATCAACACCTAAAGATGATGGAAACGGTGGTAATGTTGGCATCAAGTCTTCCAGTGTAGTGGGACTGACTCTCGGTTCAGTGATCGGCGGTATCTTTGTGGTTGCACTGATTGGTTTCTTGATTTTCTGTACATTGAAGAGGAAGCAAAAGCGGTTAAGCAGAGTCCAAAGCCCAAATGAACTGGTCATTCATCCAGGTCATTCTGCTTCTGATAATGAAGCTTTAAAGATCACAGTCTCTGGGTCTAGTATCAATGGTGCTATTATTGAAGCCCAAACTACTCTAAGCAGTGAGGCTGGAGATATCCAAAAGGTTGAAGCTGGAAGCATGGTTATCTCAATACAGGTCCTGAGAAATGTCACCGATAATTTTAACGAGAAAAATATACTGGGAAAAGGGGGCTTTGGGACTGTTTACAAAGGTGAACTGCAAGATGGTACGCAAATTGCAGTGAAAAGGATGGAATCCGGAGTGGTTGCTGACAAGGGATTAGACGAATTCATGTCGGAGATTGCTGTTTTGACAAAGGTTCGGCACCGGCATCTAGTCGCTCTCCTTGGTTACTGCTTGGACGGGAATGAGAGGCTTCTTGTTTATGAGTACATGCCGCAAGGCACACTTAGCCAACATCTCTTTAATTGGGTGGAAGAAGGGCTGAAACCTCTGAATTGGAATAGAAGATTGATCATTGCCTTGGATGTGGCAAGAGGTGTTGAGTACCTCCATGGTCTTGCTCATCAAAGCTTCATACACAGGGATTTAAAGCCCTCAAACATCCTTCTTAGTGATGATATGAGAGCCAAGGTCGCAGATTTCGGTCTTGTGCGGCTTGCTCCGGGAGATAAAGCCTCATTTGCGACAAGAATTGCTGGGACCTTCGGATATTTGGCCCCTGAATATGCCACTACCGGCCGTGTTACAACCAAAGTCGATGTCTACAGTTTCGGAGTAATATTGATGGAACTGATCACGGGAAGGAAAGCAATTGATGACACACTTCCTGAGGATTGCATTCACCTTGTAACATGGTTCCGCAGAATGCATTTGGATCAGGAATCCTTCCACAAGGCTATCGATACCACAATCGACCTAAATGAGGAGATACTTGCCAGTGTAAGTACCGTGGCTGAGCTGGCTGGCTACTGCTCTGCAAGAGAGCCTTACCGAAGGCCGGCTATGGGTCATATTGTCAATGTTCTTTGCTCTCTTGTGGAGAGCTGGAAGCCAGTTGACCAAGATTCTGAAGAAGTGTACGGGATACATTTTGATATGTCACTCCCCTTAGCGCTCAAGAAATGGCAGGGTTATGAAGGAAGAAACCCAATGGAATCATCATCTTCATCGCTTGTGCCCAGTCTAGACAGTACACAGACTAGCATACCAAGCCGTCCTAATGGCTTTGCTGAGTCCTTCACCTCTGCAGACGGGAGATAG 2826 0.4437 MKEKSHLGSDDFYLCIVGFCSLFVRVISQANPSADAPAMLALKTSLGVPDTFGWSDPDPCKWTNVICSSDKRVTSIQIKDKSLKGTLTPSLQNLTQLQHLEVQGNQISGPFPSLKELSSLQLVWLSNNQFSFFPSDFFTGLSSLQSIMLDANPFSPWEIPESLRNATALQDFSANSANIAGKIPDFFGSDVFPSLSKVHLSFNNLSGGLPKSFSGSQMKSLWVNGQRGIKLSGEIDVIQNMTSLIELWLHSNAFSGPLPDFSGLQSLEQLSVRDNMLSGPVPRSLVDLKSLKVVNLTNNLLQGPVPEFRASVDVDMSKGSNRFCLFSPGDCDSRINILLSIVESMHYPQHFADNWKGNDPCNNNWIHISCTNDGNINSVDFRKLGLAGTISPDFASLKSLQRLLLSDNNLTGTIPGVLTSLSVLTELDVSNNQLYGPVPSFKTTVKVNTQGNMNIGKDGPSPSPSTPKDDGNGGNVGIKSSSVVGLTLGSVIGGIFVVALIGFLIFCTLKRKQKRLSRVQSPNELVIHPGHSASDNEALKITVSGSSINGAIIEAQTTLSSEAGDIQKVEAGSMVISIQVLRNVTDNFNEKNILGKGGFGTVYKGELQDGTQIAVKRMESGVVADKGLDEFMSEIAVLTKVRHRHLVALLGYCLDGNERLLVYEYMPQGTLSQHLFNWVEEGLKPLNWNRRLIIALDVARGVEYLHGLAHQSFIHRDLKPSNILLSDDMRAKVADFGLVRLAPGDKASFATRIAGTFGYLAPEYATTGRVTTKVDVYSFGVILMELITGRKAIDDTLPEDCIHLVTWFRRMHLDQESFHKAIDTTIDLNEEILASVSTVAELAGYCSAREPYRRPAMGHIVNVLCSLVESWKPVDQDSEEVYGIHFDMSLPLALKKWQGYEGRNPMESSSSSLVPSLDSTQTSIPSRPNGFAESFTSADGR* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01292 941 Gene3D Ribonuclease Inhibitor 333 459 IPR032675 -
Pte13g01292 941 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Pte13g01292 941 PANTHER OSJNBA0070M12.3 PROTEIN 17 941 - -
Pte13g01292 941 ProSiteProfiles Protein kinase domain profile. 588 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01292 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Pte13g01292 941 SUPERFAMILY L domain-like 335 441 - -
Pte13g01292 941 MobiDBLite consensus disorder prediction 450 474 - -
Pte13g01292 941 Gene3D Ribonuclease Inhibitor 33 331 IPR032675 -
Pte13g01292 941 Pfam Leucine rich repeat 394 434 IPR001611 GO:0005515
Pte13g01292 941 Gene3D Transferase(Phosphotransferase) domain 1 666 887 - -
Pte13g01292 941 SMART serkin_6 588 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01292 941 FunFam receptor protein kinase TMK1 666 883 - -
Pte13g01292 941 Pfam Protein kinase domain 588 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01292 941 SUPERFAMILY Protein kinase-like (PK-like) 576 884 IPR011009 -
Pte13g01292 941 SMART LRR_typ_2 192 215 IPR003591 -
Pte13g01292 941 SMART LRR_typ_2 141 166 IPR003591 -
Pte13g01292 941 SMART LRR_typ_2 117 140 IPR003591 -
Pte13g01292 941 SMART LRR_typ_2 421 451 IPR003591 -
Pte13g01292 941 SMART LRR_typ_2 241 263 IPR003591 -
Pte13g01292 941 SMART LRR_typ_2 397 420 IPR003591 -
Pte13g01292 941 FunFam Leucine-rich repeat receptor-like kinase 333 458 - -
Pte13g01292 941 FunFam receptor protein kinase TMK1 550 665 - -
Pte13g01292 941 MobiDBLite consensus disorder prediction 903 941 - -
Pte13g01292 941 CDD STKc_IRAK 594 867 - -
Pte13g01292 941 FunFam Receptor-like kinase TMK4 33 329 - -
Pte13g01292 941 Pfam Leucine rich repeat N-terminal domain 336 370 IPR013210 -
Pte13g01292 941 Pfam Leucine rich repeat N-terminal domain 33 68 IPR013210 -
Pte13g01292 941 Gene3D Phosphorylase Kinase; domain 1 549 665 - -
Pte13g01292 941 SUPERFAMILY L domain-like 45 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01292 Pte-Chr13 21956749 21960126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01292 71 864 Receptor kinase-like Gene Family AT5G07280 32.071 1.11e-84 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pte13g01292 Pkinase 8.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01292 K00924 - qsa:O6P43_014259 1333.93