Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01290 ATGGCTGGGAAGAAGGTGAAGTTAACGGAAGATCATGAGGAAGGTGAGAGGAAAAAGAGACTTACTACTTCCTCGTCTTCGACGTCGTCTTCGACTTCTTCATCCTATGATGAAAGGGATTATCAGGTGGAAGATGTGAAGGATCCAATCAAATCGTCGAGAGGGAGTCGATTCAATCTGTTGGAGAACGAGTTAGGGTTGATTGAGTTGACTCGGAGGAAGTTCAGTCGTCAATCGTTGATCGATGGAATCAAAGGACTTTCCAGAGGCTCTGTGATTCATCCAGATAACAGGTGGTATAGACTGTGGAACAATTTCATATTAATATGGGCAATATACTCGTCATTCTTCACACCTTTGGAGTTCGGATTCATGAGGGGGCTACCGAAGAAACTCTTTGTCTTAGACATAGCTGGACAGCTAGCGTTTCTCGTCGACATTGTTGTGCATTTTTTTGTTGCGTACAGAGACAGCCAGACGTACCGAATTGTCTACAAGCGTACCCCTATAGCTTTAAGGTATTTAAAGTCTAGCTTTACTGTTGATCTTCTTGCATGCATGCCTTGGGATCTCATTTACAAGGCTTACGGAAGAAAAGAAGAAGTGAGGTATCTTTTGTGGATCAGATTGTGCAGGGTGCGCAAATGCACTGACTTCTTTCAAAAGCTGGAAAAGGACATACGCATAAACTACATGTTTACCAGGATTGCCAAACTTTTAGCAGTCGAACTATACTGTACCCACACAGCAGCCTGCATCTTTTACTATCTGGCCACCACTCTTCCTGCTTCTCAAGAGGAGTACACATGGATCGGAAGTTTAAAGCTGGGTAGTTACAGTTATTCACACTTCAGAGAAATTGATCTATCGAAGCGCTACATTACATCTCTGTATTTTGCAATTGTGACCATGGCTACTGTAGGTTATGGAGATATACATGCTGTCAATGTCAGAGAAATGATATTCATAATGATATATGTCTCTTTTGACATGGTTCTCGGCGCTTATCTAATTGGTAACATGACAGCATTAATTGTGAAAGGATCCAACACAGAAAAATTTAGGGACAGAATGACAGATGTTATGAAATACATGAACAGAAACCGACTAGGCAGGGACATCCGCGACCAAATTAGAGGTCACTTGCGCTTACAGTACGAGAGTAGCTACACTGATGCTGCCGTTCTTCAGGATATCCCCATTTCTATCCGGGCCAAGATATCACAACAATTATATTTTCCGTACATTGAGAAGGTCTACCTCTTTAAAGATTGCTCCAGGGAATTCATCAATCAGATTGTTATTAGAGTACATGAGGAATTTTTTCTTCCAGGAGAAGTGATAATGGAACAAGGGAATGTGGTAGACCAAGTCTACTTTGTCTGCCATGGTGTTCTGGAGGAGGTAGCCACTGGGGAAGATGGATCTGACAACACTGTTGCTCTTTTAGAACCTGAAAGTGTTTTTGGAGAAATATCCATTCTTTGCAACATTCCTCAGCCGTATACAGTCCGTGTTTGTGAACTATGTAGGCTCCTGCGGCTTGATAAACAATCCTTTACCAACATCCTTGATATATACTTCTATGATGGGCGGAAAATATTGAACAATCTCTTGAAGGAAAAAGAATCAAACGATCGGGTTAAGCAATTGGAGACAGACATAACTTTTCACATTGGAAAGCAGGAAGCTGAACTTGCACTGAAGCTCAATAGTGTAGCTTACTACGGGGAACTGTATCACTTGAAAGGTCTAATTCGAGCTGGAGCTGATCCCAACAAGACAGATTATGATGGACGGTCTCCATTGCACCTTGCAGCATCAAGAGGACACGAAGATATCGTACTCTTCCTGATTCAGGAAGGGGTGGAGATAAACATCAAAGATAACTTCGGGAACACACCCTTGCTTGAGGCCGTTAAAAATGGGTATGATCGAATTGCTTCTTTGCTAGTTAGAGAAGGTGGCTCATTGGATGTCGATAATGCTGGAAGCTTTCTCTGTACGGCTGTTGCAAGAGGGGATTCAGATTATCTTAAGAGGATATTGTCTTATGGCGTTGATCCCAATACAAAAGATTATGATTATCGTACTCCACTTCACATAGCTGCTTCAGAAGGACTGCATTTCATGGCAAAGTTGCTGTTAGAAGCTGGAGCTAGTGTTTTGGCCAAAGACAGATGGGGAAACACACCAATTGACGATGCCCGGATGTGTGGAAACCATAACTTGATCAAGATGCTGGAGGGAGCAAAGTCTGTTCAGTTGTCAGAGGCAAAAGAAATGACAGTTAAGACACGCCAAAGGAAATGCACAGTTTTCCCCTTTCACCCATGGAATCCCCCAGAAAATCGAAGAGCTGGAATTGTGTTATTTGTTCCACACACCATTGAAGAACTCATCCAAATGGCAGCAGAGCAACTAGGACATATAAGCGGTTCTTGTATCTTATCAGAAGATGGTGGAAAAATTTTAGACGTGAACTTGATTCAGGATGATCAGAGGTTGTACGTAGTCGACGAAACATGGTGA 2532 0.4238 MAGKKVKLTEDHEEGERKKRLTTSSSSTSSSTSSSYDERDYQVEDVKDPIKSSRGSRFNLLENELGLIELTRRKFSRQSLIDGIKGLSRGSVIHPDNRWYRLWNNFILIWAIYSSFFTPLEFGFMRGLPKKLFVLDIAGQLAFLVDIVVHFFVAYRDSQTYRIVYKRTPIALRYLKSSFTVDLLACMPWDLIYKAYGRKEEVRYLLWIRLCRVRKCTDFFQKLEKDIRINYMFTRIAKLLAVELYCTHTAACIFYYLATTLPASQEEYTWIGSLKLGSYSYSHFREIDLSKRYITSLYFAIVTMATVGYGDIHAVNVREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSNTEKFRDRMTDVMKYMNRNRLGRDIRDQIRGHLRLQYESSYTDAAVLQDIPISIRAKISQQLYFPYIEKVYLFKDCSREFINQIVIRVHEEFFLPGEVIMEQGNVVDQVYFVCHGVLEEVATGEDGSDNTVALLEPESVFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTNILDIYFYDGRKILNNLLKEKESNDRVKQLETDITFHIGKQEAELALKLNSVAYYGELYHLKGLIRAGADPNKTDYDGRSPLHLAASRGHEDIVLFLIQEGVEINIKDNFGNTPLLEAVKNGYDRIASLLVREGGSLDVDNAGSFLCTAVARGDSDYLKRILSYGVDPNTKDYDYRTPLHIAASEGLHFMAKLLLEAGASVLAKDRWGNTPIDDARMCGNHNLIKMLEGAKSVQLSEAKEMTVKTRQRKCTVFPFHPWNPPENRRAGIVLFVPHTIEELIQMAAEQLGHISGSCILSEDGGKILDVNLIQDDQRLYVVDETW* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01290 843 FunFam Potassium channel KAT2 409 546 - -
Pte13g01290 843 SUPERFAMILY Voltage-gated potassium channels 94 346 - -
Pte13g01290 843 PRINTS Ankyrin repeat signature 599 614 IPR002110 GO:0005515
Pte13g01290 843 PRINTS Ankyrin repeat signature 711 725 IPR002110 GO:0005515
Pte13g01290 843 ProSiteProfiles Ankyrin repeat profile. 598 630 IPR002110 GO:0005515
Pte13g01290 843 Pfam KHA, dimerisation domain of potassium ion channel 769 838 IPR021789 -
Pte13g01290 843 Gene3D Helix hairpin bin 348 404 - -
Pte13g01290 843 Gene3D - 556 663 IPR036770 -
Pte13g01290 843 ProSiteProfiles cAMP/cGMP binding motif profile. 421 541 IPR000595 -
Pte13g01290 843 MobiDBLite consensus disorder prediction 1 43 - -
Pte13g01290 843 Pfam Cyclic nucleotide-binding domain 441 525 IPR000595 -
Pte13g01290 843 PANTHER POTASSIUM CHANNEL AKT1 77 839 IPR045319 GO:0005249|GO:0006813
Pte13g01290 843 SUPERFAMILY Ankyrin repeat 559 749 IPR036770 -
Pte13g01290 843 PRINTS EAG/ELK/ERG potassium channel family signature 293 310 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte13g01290 843 PRINTS EAG/ELK/ERG potassium channel family signature 136 146 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte13g01290 843 PRINTS EAG/ELK/ERG potassium channel family signature 337 346 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte13g01290 843 PRINTS EAG/ELK/ERG potassium channel family signature 245 255 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte13g01290 843 ProSiteProfiles Ankyrin repeat region circular profile. 598 630 - -
Pte13g01290 843 SMART cnmp_10 421 539 IPR000595 -
Pte13g01290 843 Gene3D - 664 762 IPR036770 -
Pte13g01290 843 ProSiteProfiles Ankyrin repeat profile. 695 727 IPR002110 GO:0005515
Pte13g01290 843 ProSiteProfiles Ankyrin repeat region circular profile. 695 727 - -
Pte13g01290 843 MobiDBLite consensus disorder prediction 1 21 - -
Pte13g01290 843 SUPERFAMILY cAMP-binding domain-like 349 539 IPR018490 -
Pte13g01290 843 ProSiteProfiles Ankyrin repeat profile. 631 663 IPR002110 GO:0005515
Pte13g01290 843 SMART ANK_2a 695 724 IPR002110 GO:0005515
Pte13g01290 843 SMART ANK_2a 728 758 IPR002110 GO:0005515
Pte13g01290 843 SMART ANK_2a 598 627 IPR002110 GO:0005515
Pte13g01290 843 SMART ANK_2a 662 691 IPR002110 GO:0005515
Pte13g01290 843 SMART ANK_2a 631 660 IPR002110 GO:0005515
Pte13g01290 843 Pfam Ankyrin repeats (3 copies) 668 748 IPR002110 GO:0005515
Pte13g01290 843 Pfam Ankyrin repeats (3 copies) 574 657 IPR002110 GO:0005515
Pte13g01290 843 Pfam Ion transport protein 101 345 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte13g01290 843 Gene3D - 101 347 - -
Pte13g01290 843 MobiDBLite consensus disorder prediction 22 37 - -
Pte13g01290 843 FunFam Potassium channel SKOR 101 346 - -
Pte13g01290 843 CDD CAP_ED 421 535 IPR000595 -
Pte13g01290 843 ProSiteProfiles Ankyrin repeat region circular profile. 631 662 - -
Pte13g01290 843 ProSiteProfiles KHA domain profile. 770 843 IPR021789 -
Pte13g01290 843 Gene3D Jelly Rolls 405 545 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01290 Pte-Chr13 21891005 21898156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01290 669 751 Ion Channels AT5G37500 31.776 1.11e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01290 K21867 - gmx:100814385 1306.58