Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01289 ATGGACAAGAACAAGAACAAGGCATTGTTTCGCGCGAAACTGAACGCTCAAAAGAAGGACAAGCGCATAGAGTCTCCTCTTGTAAGGTACAATGAACTGGATCACCCTGTTTGTAAAGTATGCGATGTTGATTTCAAATCCGAGTCACTTTGGGATGCACACCAAGCTTCTCGAAAGCACCATGAGGCTATAATTAAACTGAAAGCAAATGCTACTGGACAGACCCGGAAAATTAGTGCAATCTCCACTCCACAAGTCCAATCTGAAGCTTGTGCTGTATTGCCTTCGGGAAAACCTGAAAGCTCAGCAGACTTGCCAACACCTCATTCATCGTCAGTTCTTCCTCCAGATTTCTTTGACAATATTGAAGCAAAACAGCAGAAATCAGTCAAATCAGCTGAGCATGATTTATCAAAAAGATCAGGGGGGTCCACTCAAGATGAATTGTCAAAGCAGACAGGTGGATTGCAAAGTCATAATGCTGCTGGTTTAGAAAGTGCACATCCTAAAGCTTCTGCAGAGGACGTGCAGAGATCAGTACAAGCTACCCAAATAGATCCCAAGCAAGTGAAGGGTGGTCTGCCTGCTGGCTTCTTTGACAATAAGGAAGCTGATTTACGTGCACGTGGCGTAAAGGTTGTTAAGCCAGATATGAAAGATGAGTACAAGGAATACGAAAAATTGATTCAAGAGGATCTGCAGGAGGTTGATAATCGTCTGGAAGAAGATGAGATTGATGCAGCAGAAATGATAGAGGAGGAGGAATCTATTGAGCAAAAATCTTACAGGGAGAAAGTTGAAATGCTGAAGAGGAAGAGAATTGAAATGAAGGCTGCGAAGTCTGCCAAACGCCCTAAATCTTGGGAAGTTGCAAACAGCGATTACAGCCATAGAGAGTCGTCCAGTGATGATGACAGTGAAGAGAATCTCACTGTTGATTGGAGAGCACAACATTTGTGA 960 0.4333 MDKNKNKALFRAKLNAQKKDKRIESPLVRYNELDHPVCKVCDVDFKSESLWDAHQASRKHHEAIIKLKANATGQTRKISAISTPQVQSEACAVLPSGKPESSADLPTPHSSSVLPPDFFDNIEAKQQKSVKSAEHDLSKRSGGSTQDELSKQTGGLQSHNAAGLESAHPKASAEDVQRSVQATQIDPKQVKGGLPAGFFDNKEADLRARGVKVVKPDMKDEYKEYEKLIQEDLQEVDNRLEEDEIDAAEMIEEEESIEQKSYREKVEMLKRKRIEMKAAKSAKRPKSWEVANSDYSHRESSSDDDSEENLTVDWRAQHL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01289 319 MobiDBLite consensus disorder prediction 143 160 - -
Pte13g01289 319 Coils Coil 215 260 - -
Pte13g01289 319 Gene3D Classic Zinc Finger 15 75 - -
Pte13g01289 319 MobiDBLite consensus disorder prediction 95 199 - -
Pte13g01289 319 PANTHER UNCHARACTERIZED 1 319 IPR040050 GO:0003676|GO:0005681|GO:0008270
Pte13g01289 319 MobiDBLite consensus disorder prediction 290 319 - -
Pte13g01289 319 MobiDBLite consensus disorder prediction 127 142 - -
Pte13g01289 319 Pfam Zinc-finger of C2H2 type 38 60 - -
Pte13g01289 319 SUPERFAMILY beta-beta-alpha zinc fingers 30 72 IPR036236 -
Pte13g01289 319 MobiDBLite consensus disorder prediction 276 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01289 Pte-Chr13 21879007 21884797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01289 5 320 C2H2 Transcription Factor Family AT3G02860 52.941 2.05e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01289 K13104 - jre:108988013 331.643