Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01287 ATGGGTGACAATAAAAGAAAAAGAGGTCGTAAACCTAAAACCCCATCAAAGGAAACTATGATGTTCAATACACGAGCACTGCTAGAACTTCAACCACCACGACCACTTGGGCTTGGTTGTAGAACTGCCATTGATGCCAAAATCGAATACGTCGTTAAGGCCTTGCCTTCCATAGACGCTGTGATGAAGGTGTTTTGTGTGCATACAAAACCAGATTTCTCGCTTACATGGAAGAGGAAGAGGCAATATAGTTGTAGCAGTAGTGGATTTGTCACTGGTGGAAGAGCGGTGTTAACTAATCTATATATAAACTCGAGAAATTCTGGTGGACCTGCTTTCAAAAACAAGGGAAATTGTGCTGGTATTGCATTTCAATCACTTAAACAAGAAGATGTCGAGAACATAGGATATCTCATTCCAACTCCAGTTATACAACATTTCATTCAAGATTTTAAAACGAATGGTGCACATACAGGTGAATGTAAGTATGGAAAGCTCAACTTTGAATATAGTTACTATATGCTCGAGGGAAGTACAAAGGGGAGCCTTGGAGCACCAGTTAAGGTGTTGTTGTGTGACCATGAGGTCACGCTTTCGAGTCCTAGAAGCAGCCTTTTGCAAAAAAATACAGGATACTTGAGTTCAATTCAACACAAAATTTTCAACCCACAAACGACTTATTCCAGCACACATCATGGTGAGGCCTCCTTCCTACAACTACATAATTGCAGGAATCATATTTTCTGTTGTCTCAGGAGCCCTATCTCCGTTCTCAGGTCATCTTCTGTGGACGACCAGGCCAAGAGCTCACTGGTCAATTTCATTGCCAAGCTTTCTGGTGATTCTGCACAAGCTAATGCTAACTTGGCTTGGAATCTAACCTCTGATCCTTGCAAGGATTGGAAAGGTGTAGAATGTGATAGTCGAAACACATCCATAAGGAAGTTATTTCTTGACAGGCAAGGTTTAGCTGGAACTCTTGACGCTGCTATTCTATGCAATGTGCAATCAATTGCCGATACTCTTACTGTCCTTAACATGGATGGCAACAACATTAATGGAAGCATCACAGATGAGATTGCTAACTGCAGACAACTCTCTCGTTTGAATGTTAGTGGAAACAGATTGTCTGGGGATCCCCCTAGCTCACTTGCCATGTTGAGTAACTTGAAAGGTCTTGATATGTCAAACAACAATTTTTCTGGGACATTACCAAATTTGTCCACAATCTCAGGGCTTAACATATTCCTCGCACAAAACAACAGACTCAGTGGACAGTTACCAAGTTTCGACTTTTCCAACCTTAATATCTTCAATGTATCATTCAACAACTTCAGTGGCCCAATTCCTGCTGGAGGTAATATTTTTCCTGCAGATACATTCCAAGGTAACCCCCAACTATGTGGAAGTCCATTGCCAATAACATGTCCAGCTGCCTCTAATGATAACCAGAATGAAGGCAAATCAAAAGGTCCTACCAAAGATCAGGTTATTATGTATTTAGGGTATTCTATATTAGGCATCATCATTATCTCTGCAGTACTTTGCATGATCTGTAAAAGAAGCAGGACGAGACAGAAGATTGATGCAAAGACTGAGATGGGATCACTTGAAGAAGGAACTAAGATGACTAGTATTGTATCAAGCGAGCGCAAAATAAGTGTAAGCAAATCTGAGTATTCTGTAGCTTCAGAGAGTGGAATGGTTTCAGCCTCACTGGTAGTTCTTACTACTCCTGCTGTGGATAAACTGAAATTCGACGATTTGCTCAGTGCTCCTGCTGAGTTACTAGGGAGAGGGAAACATGGTAGCCTTTACAAAGTCAAACTTGAGAACGGTACATCTTTGGTAGTTAAGAGAATAAAGGATTTGACCATTTCAAGTAATGATTTTAAGCGAAGAATGCAAGCTTTGGATCAAGTGAGGCATCCAAATGTACTGCCTGCTCTTGCCTACTATTGTTCTAAAGAGGAAAAGCTTCTGGTTTATGAATATCAACAGAACGGAAGCTTATTCAAGCTTCTCCATGGCAAATCAAAATCCTTTGATTGGGCGAGCAGACTGAACGCAGCATCTACCCTCTGCGAGGCATTATCCTTCATGCATGATGAGCTTAAACATGAGGGAATTGCGCATGGTAACTTGAAGTCCTCCAACATCTTGCTAAACAAGAACATGGAACCATGCGTAAGTGAGTACGGTCTCATGGGTGGTACGGAGCAGCGGGAGGATCATGAGAACAGTTTCTCCTTCTCTAATGCTCATGCACTGGGTGCATTATCAATTCCATTTAAAGCAGATGTTTACAGCTATGGTGTGATTCTTCTTGAGTTACTCACTGGGAAATTGGTGCAAAATGATGGGGTAGATTTGGCTGATTGGGTTCATGCTGTTGTTAAAGAAGAATGGACTGTGGAGGTGTTTGACAGGTCTCTGATATCAGAGGGTGCCAGTGAAGAAAGGATGGTGAACCTGCTTCAGGTTGCAATCAAATGTGTGAGCAACTCTCCCCCAAGCATGAACCAAGTGGTTCGCATGATCAATACACTAAAAGAAGAAGAAGAAAGATCCATGCTTTATGAAGTTTGA 2589 0.416 MGDNKRKRGRKPKTPSKETMMFNTRALLELQPPRPLGLGCRTAIDAKIEYVVKALPSIDAVMKVFCVHTKPDFSLTWKRKRQYSCSSSGFVTGGRAVLTNLYINSRNSGGPAFKNKGNCAGIAFQSLKQEDVENIGYLIPTPVIQHFIQDFKTNGAHTGECKYGKLNFEYSYYMLEGSTKGSLGAPVKVLLCDHEVTLSSPRSSLLQKNTGYLSSIQHKIFNPQTTYSSTHHGEASFLQLHNCRNHIFCCLRSPISVLRSSSVDDQAKSSLVNFIAKLSGDSAQANANLAWNLTSDPCKDWKGVECDSRNTSIRKLFLDRQGLAGTLDAAILCNVQSIADTLTVLNMDGNNINGSITDEIANCRQLSRLNVSGNRLSGDPPSSLAMLSNLKGLDMSNNNFSGTLPNLSTISGLNIFLAQNNRLSGQLPSFDFSNLNIFNVSFNNFSGPIPAGGNIFPADTFQGNPQLCGSPLPITCPAASNDNQNEGKSKGPTKDQVIMYLGYSILGIIIISAVLCMICKRSRTRQKIDAKTEMGSLEEGTKMTSIVSSERKISVSKSEYSVASESGMVSASLVVLTTPAVDKLKFDDLLSAPAELLGRGKHGSLYKVKLENGTSLVVKRIKDLTISSNDFKRRMQALDQVRHPNVLPALAYYCSKEEKLLVYEYQQNGSLFKLLHGKSKSFDWASRLNAASTLCEALSFMHDELKHEGIAHGNLKSSNILLNKNMEPCVSEYGLMGGTEQREDHENSFSFSNAHALGALSIPFKADVYSYGVILLELLTGKLVQNDGVDLADWVHAVVKEEWTVEVFDRSLISEGASEERMVNLLQVAIKCVSNSPPSMNQVVRMINTLKEEEERSMLYEV* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01287 862 Pfam Protein kinase domain 595 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01287 862 Gene3D Ribonuclease Inhibitor 264 477 IPR032675 -
Pte13g01287 862 SUPERFAMILY Trypsin-like serine proteases 74 155 IPR009003 -
Pte13g01287 862 ProSitePatterns Protein kinases ATP-binding region signature. 597 619 IPR017441 GO:0005524
Pte13g01287 862 PANTHER OS05G0588300 PROTEIN 254 852 - -
Pte13g01287 862 Gene3D - 74 161 IPR043504 -
Pte13g01287 862 ProSiteProfiles Protein kinase domain profile. 591 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01287 862 SUPERFAMILY Protein kinase-like (PK-like) 595 847 IPR011009 -
Pte13g01287 862 Pfam Leucine rich repeat N-terminal domain 265 307 IPR013210 -
Pte13g01287 862 Gene3D Transferase(Phosphotransferase) domain 1 667 861 - -
Pte13g01287 862 SUPERFAMILY L domain-like 291 451 - -
Pte13g01287 862 Gene3D Phosphorylase Kinase; domain 1 559 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01287 Pte-Chr13 21848808 21859326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01287 270 851 Receptor kinase-like Gene Family AT1G68400 34.505 8.93e-91 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte13g01287 Pkinase 3.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01287 - - qsa:O6P43_008998 716.072