Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01286 ATGTCACGAGGATATGCGATTGAGCTTTACTTTGACCCCGCACTTGAAAACCAGGTTTTGAAGGCCTGGAATGTATTGGCTAGGCGACAGATCAGTACTCAGCTTATAGAAATTGAGTCACGCCCACACATTACTCTCTTTTCTAGCTCCTCTATTGATCCTGTGAAGCTTGAGTCCATTGTGAAGACTTTTGCTTCAATGCAAGATCCATTAGCCTTGTCATTCTCTTCAATTGGGAGTTTAACAAACGACAACAATGTGCTGTTTTTGGCACCAACTCCTTCCATTTCAATCCTGAAGTTTCAATCTCAGTTGTGTGATGCAATCAGGAAAGAAGGAATTGAGATAGGAGAGGAATATCGACAGGATTCATGGATTCCTTATTGCGCAGTTGCTGAAGAGGTGCCAAGGACTCGGATGGCTGAGGGGTTTTGTGTTTTGCGAGACTTGAAGTTACCAGTCACAGGGTATGCGTTGGATATTGGGTTGGTGGAATTTTCACCAGTTCGTGAACTCTTCTCCTTTGTTCTTGGGAGTACAACTGAATCGTAA 552 0.4348 MSRGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSSSIDPVKLESIVKTFASMQDPLALSFSSIGSLTNDNNVLFLAPTPSISILKFQSQLCDAIRKEGIEIGEEYRQDSWIPYCAVAEEVPRTRMAEGFCVLRDLKLPVTGYALDIGLVEFSPVRELFSFVLGSTTES* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01286 183 SUPERFAMILY LigT-like 4 132 IPR009097 -
Pte13g01286 183 PANTHER - 1 181 - -
Pte13g01286 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Pte13g01286 183 Pfam 2'-5' RNA ligase superfamily 41 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01286 Pte-Chr13 21845944 21847700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01286 1 184 Calmodulin-binding Proteins AT5G40190 70.652 2.28e-93 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01286 - - cave:132181051 320.472