Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01282 ATGGACTCTACCCCACCATCCCTTAAAGCCTCTTCTTCTGCCTCCATCACTAAGCTTCCCATCAAACGCAAGTCCCCATCTGACTCGAACCCTTTCAATCCCGTGCCTGTTCCTGAATTTGTTTCAAGTCAATCCGAATCAATCGTACCCGGACTGTCCGATCGGTGCCTGACCCTTAATCTCGCCGATCCGTTTCCAACCGCTCCCGCCGATTACAGCCCCAACCCACTCCGTTTCAAGTTCCAACGAATTTGGACGGAGCCCAACGAAATTCGTTTCCTTCAGGGTCTTCTTGACTCTTCTTCGGAAGGGCTTGTTTTCCCTAGAGATTTACAACTCTTCTATGATCGTTTCTCGACCTCCAGGTTTCAACCTTACACCAAGTCCCAGCTTTCTGAGAAGCTTCGGAGGCTGAGAAAGAAGTTCCGGGTCACATCTGCTCGACTCTCTCGTGGGCTTGATCCTATGACGTTGTCGCCTCATGATCGGGCTCTGTACGAGCTGTCCCAGAAACTCTGGAGTCCTGAGTTCTCGTCATCTACACAGTTTGTGAGCAATTCGAACCAAGGGAATGGGAATGGCGGAAAGAACAAAGTTAATGTAAGTGATGCAGGAATAGGAATGATTAAGCTAGGTCCGTTGTCACCATCTCTGAGCTTATCTAAAAACCCTAATCAGACCGAGCAGAAGGGAAACGTTGATTTGTTGGACGGAGATGGCAAGATGATTGGTGTTGGCGGCTATGACAATGGTGTTAAAATGAGTGAGGTGAGTATCGGTGATTGTGATTTTGCAGCGAAAAAAGAGGATCATCATCGCTCAAATTGCGGTATGAGGTTTGGCGGATTAGCTGCGGAAACAGTGTTGAATGTATTTGATCAATGTCTCAAAGAGTTTAGAGTGGCTCTTCTCAGCAAGGGGCTCAAGTACCCCCTCAATGAATCTAGAAATAGTGTATCTCTTACTTGTAATGCTAAAGATGCAGACTTTGCAAGGCGTTGGCAAGAGCAACAGGCTGTGGAATTGGATGTGTTTACTAGGCGCTTGAGGTTGATTCTTGAGAAATCTCTCCATCGGCAATGA 1083 0.4728 MDSTPPSLKASSSASITKLPIKRKSPSDSNPFNPVPVPEFVSSQSESIVPGLSDRCLTLNLADPFPTAPADYSPNPLRFKFQRIWTEPNEIRFLQGLLDSSSEGLVFPRDLQLFYDRFSTSRFQPYTKSQLSEKLRRLRKKFRVTSARLSRGLDPMTLSPHDRALYELSQKLWSPEFSSSTQFVSNSNQGNGNGGKNKVNVSDAGIGMIKLGPLSPSLSLSKNPNQTEQKGNVDLLDGDGKMIGVGGYDNGVKMSEVSIGDCDFAAKKEDHHRSNCGMRFGGLAAETVLNVFDQCLKEFRVALLSKGLKYPLNESRNSVSLTCNAKDADFARRWQEQQAVELDVFTRRLRLILEKSLHRQ* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01282 360 PANTHER BNAANNG10740D PROTEIN-RELATED 9 354 IPR007592 GO:0006355
Pte13g01282 360 Pfam Protein of unknown function, DUF573 81 174 IPR007592 GO:0006355
Pte13g01282 360 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01282 Pte-Chr13 21705050 21706995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01282 78 355 GeBP Transcription Factor Family AT5G28040 27.273 5.48e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pte13g01282 DUF573 1.9e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01282 - - qsa:O6P43_020588 269.24