Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01276 ATGCGAGGGAGGGGAGCCGTGGGTTCAGTGGAGTGTGGCAAACACAAGACAAGAAGTTGGGAAGGAGGGGCGCAAAGTTTTGGTTTACGCACTGCAAAAGGAGTCCTTCTATGTGGTCCACCTGGAACAGGAAAAACTTCCCTGGCTCGATTATGTGCCCAAGATGCTGGTGTCAAACTTTTCTGTGTAAATGGACCTGAGATTATAAGCCAATACTATGGTGAAAGTGAGCAAGCACTGAATGAAGTTTTTGATTCAGCAAGCCATGTTGCTCCGTCCGTGGTTTTCATTGATGAGTTGGATGCCATTGCACCTGCAAAAAAGGATGGAGGTGAAGAGCTAACTCAGAGAATGGTTACTACATTATTAAACTTGATGGATGGGATTGGTAGGACCGAAGGACTACTTGTTATCGCTGCCACCAACAGGCCTGATACCATTGGTCTTTCTGTTTACAGAGGAGCTCGATTACTCGGGGGAGAGGAAGGTTGGATTTCTGTTCGGGGAAAGAGCACGGCTGCTTGGTGGGGTGGGGGGAGGTGA 543 0.4843 MRGRGAVGSVECGKHKTRSWEGGAQSFGLRTAKGVLLCGPPGTGKTSLARLCAQDAGVKLFCVNGPEIISQYYGESEQALNEVFDSASHVAPSVVFIDELDAIAPAKKDGGEELTQRMVTTLLNLMDGIGRTEGLLVIAATNRPDTIGLSVYRGARLLGGEEGWISVRGKSTAAWWGGGR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01276 180 PANTHER AAA-FAMILY ATPASE 25 148 - -
Pte13g01276 180 Pfam ATPase family associated with various cellular activities (AAA) 35 156 IPR003959 GO:0005524|GO:0016887
Pte13g01276 180 SMART AAA_5 31 162 IPR003593 GO:0016887
Pte13g01276 180 Gene3D - 11 158 IPR027417 -
Pte13g01276 180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 157 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01276 Pte-Chr13 21569153 21570768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01276 27 157 Calmodulin-binding Proteins AT3G56690 70.992 2.38e-57 191