Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01273 ATGTGTGATTTTACTGTTTGTAATGGTAGGAAGAGTATTGGGAAGATGGGCCTGAGTTGCGTGTTTAGAGGTACAATTGGGCTTTTGAGGACAGCAGTGGCTATAAAGCGATTGGACAAGGCACACAAGGAGACTTTCAAGGCTTTACCCAAATGTTGTTCTACTTCTAGGGTTTTGTATTTATGCAGAAGACGGTCTTTTTCTGGGAGAAAGAAGAGCGTGAAGGGGAATTCCTCACTTCCGTGGTCTGTGAGGTATAAGGTTGCCATTGGAATAGCTGAAGCTGTAGCATATCTACATAACGGGACAGAAAGATGTGTTGTGCATAGAGATATCAAGCCTTCCAACATTCTCCTCTCTTCTAATTAG 369 0.4282 MCDFTVCNGRKSIGKMGLSCVFRGTIGLLRTAVAIKRLDKAHKETFKALPKCCSTSRVLYLCRRRSFSGRKKSVKGNSSLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSN* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01273 122 SUPERFAMILY Protein kinase-like (PK-like) 11 122 IPR011009 -
Pte13g01273 122 Gene3D Transferase(Phosphotransferase) domain 1 4 122 - -
Pte13g01273 122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Pte13g01273 122 PANTHER OS08G0249100 PROTEIN 42 121 IPR046958 -
Pte13g01273 122 Pfam Protein kinase domain 76 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01273 122 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01273 Pte-Chr13 21555864 21558870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01273 11 122 Receptor kinase-like Gene Family AT5G10530 34.091 2.02e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte13g01273 Pkinase 5.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01273 - - qsa:O6P43_014312 141.354