Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01272 ATGAAGAGGGATCATCGAGAAGCCTATGGTGCTGGGAGTAGTTGTGTGGGCTATGGAAGAACTTGTAATGCTACTGCTGCTGCAAAAACGGACGGCTCAGTAATGTCAAGTGATAAGATGAAGATGTGGAGACAAGACGAACCTGAAGCTAGTGGAATGGATGAGCTGCTTGCTGTTTTGGGTTACAAGGTTCGGTCTTCGGACATGGCTAAGGTGGCTCAGAAACTTGAGCAGCTTGAGATGGTTATGGGTTCGGCTCAAGAAGACGGGATTTCGCACCTGGCTTCTGATACCGTTCACTATGACCCTTCTGATATGTCCGCTTGGGTTCAGAGTATGCTGTATGAGCTCAACCATTCATCTAGCAATCTTGACTCTATCTTAGCTCCAGCTGAGTCTTCCACTACCATAACCACCTTCAATTTCTCAAATTCCAAGCAAGGGATTGAATCCCAGTCCCAAGTTTTCACTGATGATTCTGAGTATGATCTCAGAGCAATCCCTGGTGTGGCGGCGTACCCACAAAATGACCTAACCTCCGAAAGCGAAACAAGTCGGAAACGATACAGAACTTCAACGGGATCTTCCGATTCTGTTCAGTTTTTACCTTCTTCATCACCATCACCGATGGCGATGTCTTCGCCCAGCGCGTCTGAGCCAACTCGTCCTGTTGTGCTGGTTGACTCACAGGACACCGGTGTCACACTCGTTCATTCTCTTTTGGCTTGTGCAGAAGCTGTTCAGCAAGACAACCTTAAACTCGCTGATACGCTCGTGAAGCACATAGGTTTACTTGCTGTTTCTCAAGTCGGCGCCATGAGAAAAGTCGCAACCTACTTCGCTCAAGCTCTAGCTCGTCGAATTTATAGATTGTACCCAACACAAGATTTTTCGGACTTTATCTCCACCGATATCCTTGAGATGCACTTCTACGAGTCCTCTCCTTACCTCAAATTCGCTCACTTTACCGCCAACCAAGCCATACTTGAAGCTTTCGCCACCGCTAGCAGAGTCCATGTGATCGATTTCGGACTCAAGCAAGGTATGCAATGGCCGGCCCTAATGCAAGCTCTTGCATTACGACCCAGTGGTCCACCGGCTTTTCGATTAACCGGAATTGGACCGCCTCAGCCGGATAACACCGATGCTCTGCAACAAGTGGGCTGGAAGTTAGCTCAATTAGCTGAAACCATAGGTGTCAAGTTCGAGTTCCGTGGGTTTGTCTGTAATAGTTTGGCGGATCTCGAACCGTCCATGCTGGAGATCCGACCCGCTGAGGTCGAGACTCTGGCTATCAATTCCGCTTTTGAGCTCCACCGATTATTGGCCCGACCCGGCGCAAGCGAAAAGGTTCTGAATTCAATCAAAACCATGAAACCTAAGATCGTGACTGTCGTAGAACAAGAAGCGAATCACAATGGACCGGTCTTCCTAGACCGGTTCACCGAAGCATTACATTATTACTCGACCTTGTTTGACTCGTTGGAAGAATCATCTCAAGGGGTAAGTCCTACGAGTCAAGACCTGGTTATGTCTGAAATTTACCTGGGTAATCAGATATGCAACGTGGTAGCCTGTGAAGGTCCAGAGCGAGTTGAAAGGCACGAGACTTTGAGTCAATGGAGAGAGAGAATGTGTTCGGCAGGGTTCGAACCTGTTCACCTTGGATCCAACGCTTTCAAGCAGGCTAGTATGTTGTTGGCTCTCTTTGCAGGCGGTGATGGATACAAAGTAGAAGAGAACAGCGGGTGTCTCATGCTTGGATGGCACACACGACCGCTCATCGCCACCTCAGCCTGGCGAATCACCGAGTGA 1815 0.4876 MKRDHREAYGAGSSCVGYGRTCNATAAAKTDGSVMSSDKMKMWRQDEPEASGMDELLAVLGYKVRSSDMAKVAQKLEQLEMVMGSAQEDGISHLASDTVHYDPSDMSAWVQSMLYELNHSSSNLDSILAPAESSTTITTFNFSNSKQGIESQSQVFTDDSEYDLRAIPGVAAYPQNDLTSESETSRKRYRTSTGSSDSVQFLPSSSPSPMAMSSPSASEPTRPVVLVDSQDTGVTLVHSLLACAEAVQQDNLKLADTLVKHIGLLAVSQVGAMRKVATYFAQALARRIYRLYPTQDFSDFISTDILEMHFYESSPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPSGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVKFEFRGFVCNSLADLEPSMLEIRPAEVETLAINSAFELHRLLARPGASEKVLNSIKTMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEESSQGVSPTSQDLVMSEIYLGNQICNVVACEGPERVERHETLSQWRERMCSAGFEPVHLGSNAFKQASMLLALFAGGDGYKVEENSGCLMLGWHTRPLIATSAWRITE* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01272 604 Coils Coil 69 89 - -
Pte13g01272 604 ProSiteProfiles GRAS family profile. 227 601 IPR005202 -
Pte13g01272 604 SMART DELLA_2 54 127 - -
Pte13g01272 604 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 177 597 IPR005202 -
Pte13g01272 604 Pfam GRAS domain family 236 601 IPR005202 -
Pte13g01272 604 MobiDBLite consensus disorder prediction 174 221 - -
Pte13g01272 604 FunFam DELLA protein GAI 52 117 - -
Pte13g01272 604 Gene3D - 52 117 IPR038088 -
Pte13g01272 604 MobiDBLite consensus disorder prediction 191 221 - -
Pte13g01272 604 Pfam Transcriptional regulator DELLA protein N terminal 54 121 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01272 Pte-Chr13 21550740 21553687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01272 1 603 GRAS Transcription Factor Family AT2G01570 59.194 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte13g01272 GRAS 1.8e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01272 K14494 - qsa:O6P43_020590 885.174