Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01265 ATGGCCGCTGTTCGCTTCTTCCTCCTCCACTCTGTTCTTCTTTCCTTCGTCCTCTTCTCTCGTTCTTCTTTCTCGTTACCAGAATCCGATGCCCTTCTCAAGCTCAAGGGTTCTTTCACAAATGCCGCTGCTTTATCTAACTGGACACCAAACTCTTCTCCATGCAGAGACAAATGGGTTGGTATCGTCTGCAACAAAGACACCATCACAGGTCTTCGTCTATCTAGCATGGGGTTATCTGGTAAGATTGACGTCGAGCCTTTGCTTCGAATTCCTTTCCTTCGAGTGGTCAGCTTTGTCAACAATTCCTTCACCGGACCCATCCCAGATTTGAACAAGTTGGGTGCATTGAAGGCTATGTTCTTGAGTGGGAACAAATTCTCAGGCTCCATACCAAAGGATTACTTCTCCAAGTTAGGTTCCTTGAAGAAAGTCTGGCTAGATGGCAACAAGTTTGATGGTGCCATACCAGAGTCCTTAACCAAAATACCTAATCTCCTTGAATTGCACCTTGAAGACAATGCTTTCTCTGGACATATTCCTGCATTGAAACAAGCGACATTGTCTTCTTTCGATGTCTCCAACAACAAACTAGGAGGTGAAATTCCAGAGAGTTTGGTCAGATTTGGTGCAAGTTCTTTCAAAGACAATGAGAAAACTTGCGGGAAACCTCTAAAGAAGGATTGTACTGCTCCCGTTGAACCGGTTGCATCCCCACCACCACCAACATCAAATAATTCCGGTTTCAAAAAACCGAGTCATTCAGCTTCTCCCGCCACCATAGCAATCGCGTCCGTTGCATCTTTGGCCGTTGTTCTAGTGGTATTTGTAGTTTTTAAGGTGTCAAAGCGTAAGGGTGACGATGTTAGCGTCGTTGATAAGGAAGGCATGGTGGATGACAAGGTTGAAGTTCATGTAGATGGGGCCGCTCCCGCCAACGGCCCTCCAATGAATACAGGGGGCCAAAAGAATTCAATGAGTGATCTCGTAATGGTGAACGATGAAAAGGGTGTATTTGGATTGTCAGATTTGATGAAGGCAGCTGCAGAAGTATTAGGGAATGGAGGATTTGGTTCAGCATATAAAGCTGTTATGGCGAATGGGTTGACTGTGGTTGTGAAAAGATTAAAGGAAATGAATAGAGTGGGCAGAGATGGGTATGATGCTGAGATTCGAAGGTTTGGAAGATTAAAACACAAAAATATTTTGACACCTCTGGCTTTCCATTACAGAAAAGAGGAGAAACTTATAGTCTCAGAATATTTTCCAAAAGGCAGCTTGTTAAATGTCTTGCACGGTGATAGAGGAGCTAGTCATGCTGATTTGAACTGGGCTATCCGTTTGAAGATTGTTCAAGGAATTGCTAATGGATTGGGATATCTCCATACTGAATATGCTTCCTATGACCTGCCCCATGGAAACCTTAAGTCCAGCAATGTCCTTCTACGTCAAGATTATGAGCCACTGCTGTGTGACTATGCCTTTCATCCACTAGTCAACCCTAATAGTGCAGTGCATTCCTTGTTTTCTTTCAGAACCCCAGATTACATGCACTACCAGGAAGTCTCACACAAGACTGATGTCTATTGCCTTGGAATTGTTATTCTTGAAATCTTGACTGGCAAGTTTCCTACTCAGTATTTAAACAGTGGAAAGGGTGGAACAGATATTGTGAATTGGGTTACTACTGCTATTTCTGAGCAAAGAGAAGCAGAGGTGATTGATCCACAGATAGCAAGTGACACAGAATCAGTCCATCAAATTCTGCAACTCCTCCATATTGCGGTTGCTTGTGCTAAAAGCAACCCAGAAAACCGGCCTACTGTGCAAGAAGTGATTAGAAAGATAGAGGAGATACAGAAGTTAAACTGTCTACGTGGAAGTCGAAGACACTGTGGAAATTGGAGTACTGGACTCTCGAGTCTTAACGAACCAGAAAAACCTCAGTCGATCACTAGGGTGTTGATTTCTGCCACCTACAAATTACAGATCGGCGTCGGAGTAATGTATCGGACGGCGGTGAAGCGACTTGGTGTCATCCGTTCGACCTTGCGTAACAGTAACAATGCTCGTTTCCGATTCCCTCTACCAATTCAAACGATCACAGGCACCTCTCACTGTTCTTCTTATGCAAATCCTGCTCAACCGTCATTCTCTAATCAGAACGAGAACCCCCAAAACCAAAGCTCTAGTTTTCCAGATTCTTCGTCGACTTCTTCATCTTCAACCCAGTCCACATCATCAACGGCTCAGGATGTCCCACGCCGCGACAAGACCTCGAGTTCTCGAGCTCGGTACGAAGACGAGCAAGCTCTCGTGCTTCAGGCCTCGCTTCCCCATGTTATGATATTGGGATGGACGGAAGCTGCACTGATTGCTGGGGCGAGGGATGTTGGCCTCTCACCTTCAATTATTGGGTCTTTACCGAGGAAAGAAGCTCAACTAGTTGAGTTTTTCATGGATGATTGCTTGCAAAAGCTGATCGATATAATTGACTCTAATGAAGAGTTTAAAAATTTGACACCTAGCGAACGTATATCCAAGCTGGTTAGGATTCGACTTGAGATGCAAGCTCCTTATATATCCAAATGGCCTCAAGCTCTTAGCATTCAGGCCCAACCAGCAAATGTTTCATCAAGTTTTAAGCAGCGGGCTATGCTTGTTGATGAAATCTGGCATGCAGTTGGTGATGATGCCTCTGACATTGATTGGTATGTCAAGCGAACTATTCTTGGAGGAATTTACTCAGCAACTGAGATTTACATGTTGACCGATGGCTCCCCAGGTTTGCTTTCCTTTGCATCTCCTGCATGGATTAGTGTGGACTTTATTACTCAAGAACCTGATAATTACCTCCAAGTTATTCCGGTGTTGTCCATATGCGTTTTCCTTATACAAAATAAAGTCAGTTGTTATCTCTGTCCCAATCTTCTTTTTTGCAATATCATTAATTTTCCATCTCGTGGACATTTAGAGGGTGCGAGAAAAATTAAATCGCTTAACTTTTGA 3009 0.4387 MAAVRFFLLHSVLLSFVLFSRSSFSLPESDALLKLKGSFTNAAALSNWTPNSSPCRDKWVGIVCNKDTITGLRLSSMGLSGKIDVEPLLRIPFLRVVSFVNNSFTGPIPDLNKLGALKAMFLSGNKFSGSIPKDYFSKLGSLKKVWLDGNKFDGAIPESLTKIPNLLELHLEDNAFSGHIPALKQATLSSFDVSNNKLGGEIPESLVRFGASSFKDNEKTCGKPLKKDCTAPVEPVASPPPPTSNNSGFKKPSHSASPATIAIASVASLAVVLVVFVVFKVSKRKGDDVSVVDKEGMVDDKVEVHVDGAAPANGPPMNTGGQKNSMSDLVMVNDEKGVFGLSDLMKAAAEVLGNGGFGSAYKAVMANGLTVVVKRLKEMNRVGRDGYDAEIRRFGRLKHKNILTPLAFHYRKEEKLIVSEYFPKGSLLNVLHGDRGASHADLNWAIRLKIVQGIANGLGYLHTEYASYDLPHGNLKSSNVLLRQDYEPLLCDYAFHPLVNPNSAVHSLFSFRTPDYMHYQEVSHKTDVYCLGIVILEILTGKFPTQYLNSGKGGTDIVNWVTTAISEQREAEVIDPQIASDTESVHQILQLLHIAVACAKSNPENRPTVQEVIRKIEEIQKLNCLRGSRRHCGNWSTGLSSLNEPEKPQSITRVLISATYKLQIGVGVMYRTAVKRLGVIRSTLRNSNNARFRFPLPIQTITGTSHCSSYANPAQPSFSNQNENPQNQSSSFPDSSSTSSSSTQSTSSTAQDVPRRDKTSSSRARYEDEQALVLQASLPHVMILGWTEAALIAGARDVGLSPSIIGSLPRKEAQLVEFFMDDCLQKLIDIIDSNEEFKNLTPSERISKLVRIRLEMQAPYISKWPQALSIQAQPANVSSSFKQRAMLVDEIWHAVGDDASDIDWYVKRTILGGIYSATEIYMLTDGSPGLLSFASPAWISVDFITQEPDNYLQVIPVLSICVFLIQNKVSCYLCPNLLFCNIINFPSRGHLEGARKIKSLNF* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01265 1002 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Pte13g01265 1002 FunFam Ubiquinone biosynthesis protein COQ9, mitochondrial 765 933 - -
Pte13g01265 1002 SUPERFAMILY Protein kinase-like (PK-like) 350 616 IPR011009 -
Pte13g01265 1002 Pfam COQ9 874 929 IPR013718 -
Pte13g01265 1002 ProSiteProfiles Protein kinase domain profile. 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01265 1002 Gene3D Tetracycline Repressor, domain 2 765 934 - -
Pte13g01265 1002 Gene3D Phosphorylase Kinase; domain 1 317 421 - -
Pte13g01265 1002 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Pte13g01265 1002 MobiDBLite consensus disorder prediction 707 766 - -
Pte13g01265 1002 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Pte13g01265 1002 Gene3D Transferase(Phosphotransferase) domain 1 422 629 - -
Pte13g01265 1002 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 621 IPR046959 -
Pte13g01265 1002 NCBIfam COQ9 family protein 770 929 IPR012762 GO:0006744|GO:0008289
Pte13g01265 1002 Pfam Protein kinase domain 350 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01265 1002 MobiDBLite consensus disorder prediction 225 254 - -
Pte13g01265 1002 MobiDBLite consensus disorder prediction 707 755 - -
Pte13g01265 1002 SUPERFAMILY L domain-like 26 207 - -
Pte13g01265 1002 Gene3D Ribonuclease Inhibitor 137 231 IPR032675 -
Pte13g01265 1002 FunFam Nuclear pore complex protein NUP107 26 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01265 Pte-Chr13 21452344 21460079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01265 1 619 Receptor kinase-like Gene Family AT3G42880 45.666 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte13g01265 Pkinase 8.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01265 - - qsa:O6P43_002644 716.072