Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01262 ATGATCGGCAAATTACAACCACGGAAGAAAGTTACGTCCTTGACTTTATTCCCTCAGGAAACTGCTCTTAGTTCCTCTGTTGCAGAGGAAGATATTTCAAAGATGATTCATCGTCATTCAAGTACTGCTGTGAATAAGTCTGCTTCTGAAGAACAAAAGAGAGCGCAGATGACAATCTTCTATGGTGGGCAAGTGTTTGTATTTGATGATTTTCCTGCTGAGAAAGCACATGTGATGCCATTGAACAGTAAAAGCTGTTCTAGAAACCATGACACTTTTGCTCCTTCAGTGGCTCAAAATCTGCAGTCAATTAATTCAAAGATGGTCCCAACTGCAGTGAACTCCAGTACTCCATTTTCTTCCAATATCAATATCACTCTATCAACTAACAACAATTTGATTCAAGAGTGCAATAGGCAACAATGGAATAGAACTGTTATTTATGACAAGTTTTTGGACTGA 462 0.3853 MIGKLQPRKKVTSLTLFPQETALSSSVAEEDISKMIHRHSSTAVNKSASEEQKRAQMTIFYGGQVFVFDDFPAEKAHVMPLNSKSCSRNHDTFAPSVAQNLQSINSKMVPTAVNSSTPFSSNINITLSTNNNLIQECNRQQWNRTVIYDKFLD* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01262 153 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 33 109 IPR040390 -
Pte13g01262 153 ProSiteProfiles Tify domain profile. 50 85 IPR010399 -
Pte13g01262 153 Pfam tify domain 52 77 IPR010399 -
Pte13g01262 153 SMART tify_2 50 84 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01262 Pte-Chr13 21437236 21437803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01262 3 114 Tify Gene Family AT1G74950 34.091 4.43e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte13g01262 tify 1.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01262 K13464 - qsa:O6P43_002641 87.8113