Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01259 ATGCGTGAGTACGGTCCACAGCACTACAGTCCTCCCAGAAGAGGATATGGCAATCACGGTAGGAGTTCTCCAAGAAGAGGGCATGGTGGAGGTGGAGGTAGACGCAGGGAGCAAAATCATGGAAGTCTTTTGGTCAGGAATATTCCCTTAGATTGCAGACCTGAGGAACTTCGTCTACCCTTTGAGAAGTATGGACAGGTCAGGGATGTCTATATCCCCAGAGACTATTACACAGGAGAACCACGAGGCTTTGCATTTGTGGAGTTTGTGGATGCATATGATGCCTCTGAGGCACGATATCATATGAATGGAAGAATCTTTGCTGGACGGGAGATATCTATTGTTGTTGCAGCAGAATCAAGGAAAAGGCCTGAAGACATGCGTCATAGGACAAGGCTCAGAGGTACATCAGGCTATGGAGGACGACGATCTTCATATTATGGACGTTCTCGGTCTCGCTCAATTTCCAGATCTAGTACTCCTCCTCATGTTTCAGGCTCTAGAAGCCGTTATCGCTCAAGGTCCTATTCACCTGCTCCAAGGCGTCAAAGTGATTGTTCTGTCTCTCCAAGAAGCAGACATGGAGGTCACCCAAAATCTCCTAGAGATTCACGAAAGGAGCGAGATGATGATCATTATCATAGGTCACATTCTCCCGGTCATGACATTGCTGCTGATCCCAACCATAGGAGTGGATATAGAGAGAGAATGTCACCTGCCAGAGTATCGAGGTCACCCTCTGGATCGAGATCACGATCTGCTGATCCTTCACCTGGACGTGGCAGATGA 789 0.4816 MREYGPQHYSPPRRGYGNHGRSSPRRGHGGGGGRRREQNHGSLLVRNIPLDCRPEELRLPFEKYGQVRDVYIPRDYYTGEPRGFAFVEFVDAYDASEARYHMNGRIFAGREISIVVAAESRKRPEDMRHRTRLRGTSGYGGRRSSYYGRSRSRSISRSSTPPHVSGSRSRYRSRSYSPAPRRQSDCSVSPRSRHGGHPKSPRDSRKERDDDHYHRSHSPGHDIAADPNHRSGYRERMSPARVSRSPSGSRSRSADPSPGRGR* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01259 262 MobiDBLite consensus disorder prediction 196 237 - -
Pte13g01259 262 MobiDBLite consensus disorder prediction 147 190 - -
Pte13g01259 262 MobiDBLite consensus disorder prediction 1 42 - -
Pte13g01259 262 SMART rrm1_1 42 115 IPR000504 GO:0003723
Pte13g01259 262 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 112 IPR000504 GO:0003723
Pte13g01259 262 FunFam Serine/arginine-rich SC35-like splicing factor SCL30 isoform A 34 175 - -
Pte13g01259 262 SUPERFAMILY RNA-binding domain, RBD 38 148 IPR035979 GO:0003676
Pte13g01259 262 MobiDBLite consensus disorder prediction 121 262 - -
Pte13g01259 262 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
Pte13g01259 262 Gene3D - 36 156 IPR012677 -
Pte13g01259 262 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 36 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01259 Pte-Chr13 21349682 21353674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01259 31 104 Eukaryotic Initiation Factors Gene Family AT3G11400 39.189 1.19e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01259 K12900 - qsa:O6P43_014324 273.092