Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01258 ATGAAATCTTCATCACTGGTTGCAAATTTTCTGTACCACACATGCATGTTACGGTCTCAGTTTATGCCAATATATACTCATCCTGTATTCATTTCCATTGTAGGGAAAAGTGATCCATATGTTTTGATACAGTACAAAAATCAAGAGCGCAAAACCAGCGTTGCAAGTGAGCAGGGAAGCAATCCAGTTTGGAACGAGAAATTCACATTCAGAGTAGAATACCCAGGAGAAGGCAACCAATATAAGATCACCCTCAAAATCATGGACGAGGACCTTTTCTCTGAAGATGACTACCTAGGTCAAGCCACAATCTATATAAAGGATTTGCTAGCGCAAGGAGTTGAGAATGGAACCGCTGAGCTTCGAACAACCAAGTATAATGTTGTTCGTGCTGATGGAACATACTGCGGAGAAATTCAAGCTGGTGTTAAGTTCACCAAAAAGGAACAACACGCATTTGATGAAGAGGACATAGGAGGATGGAAGGAAAGTGAGTACTAA 501 0.4092 MKSSSLVANFLYHTCMLRSQFMPIYTHPVFISIVGKSDPYVLIQYKNQERKTSVASEQGSNPVWNEKFTFRVEYPGEGNQYKITLKIMDEDLFSEDDYLGQATIYIKDLLAQGVENGTAELRTTKYNVVRADGTYCGEIQAGVKFTKKEQHAFDEEDIGGWKESEY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01258 166 PANTHER C2 DOMAIN-CONTAINING 33 149 - -
Pte13g01258 166 SMART C2_3c 11 118 IPR000008 -
Pte13g01258 166 Pfam C2 domain 34 119 IPR000008 -
Pte13g01258 166 ProSiteProfiles C2 domain profile. 1 119 IPR000008 -
Pte13g01258 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 32 148 IPR035892 -
Pte13g01258 166 Gene3D C2 domain 29 147 IPR035892 -
Pte13g01258 166 PRINTS C2 domain signature 83 91 IPR000008 -
Pte13g01258 166 PRINTS C2 domain signature 33 45 IPR000008 -
Pte13g01258 166 PRINTS C2 domain signature 58 71 IPR000008 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01258 37 158 C2H2 Transcription Factor Family AT4G21160 30.328 4.33e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01258 - - qsa:O6P43_014325 199.519