Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01243 ATGTCCAGATTATGCTTTCATTTTGTATTCTTCATTTTGTCAGTACATTACTTATTAATGGCTGATTTAGTTACGTGTGATCTTCATGACAGCATAGCCATGGATGAATCAGCACTAGTTGCATTCAAGGCTTCGACCATTAAGGATCCTCACAGTTTCTTGTTTAACAATTGGTCTACTTCTTCCCCAGTATGCAATTGGATTGGGGTCACGTGTGATGCCAACCAAGGAAGAGTCATAGGGTTGAATCTCAGCAACATGGGTCTTGTTGGTACCATACCCCCACATGTCGGAAACCTATCTTTTCTCATTCAACTTGACCTTCGCAAGAACAGTTTCCATGGCCATTTACCTTCAGAGTTGGCCAGTTTGAAAAGATTGAAGCTGCTTGATTTGAGCTTCAACAACATTAATGGTGAAGTTCCACCATGGATAGCAGATTTGTCTCAGCTTCAACAGTTGAGACTTAGAAATAACAAGTTCAGTGGGATCATCCCAAATGCGTTGTACAACTTATCAAAGCTTGAGATATTGGATTGCATGGCTAATTCCATCGTAGGATACATTCCACCAGATATTGGTAGACTCACAAATCTGAGGCTTCTGCGGTTTCAAAGTAACAAGCTTTCCGGCTCATTACCTGCAACTATCTTCAATATTTCATCCCTCCGACAAATCAATTTCGGATATAATGCCTTGTCAGGGTCCTTTCCGGCAGTTATTTTGAAGATTCCCACTCTTGAAAGGCTTGTCATAGGCTATAATAATTTTTCAGGGAAGCTACCAGAAGATATGTGTCACGGCCTTCCCAAGCTTAAAGTACTAAGAATTTCCGGCAATAAGTTTTCTGGTCAGCTTCCCTCAAGTTTAAGTCAATGCGAAAAGCTTGAACATCTCTACATGAACGACAATAGATTCCATGGCTATATACCAACAGACATTGGGAAATTAACCAAACTCCTGGAGTTCAGTCTCACAAACAACAATTTGACAGGTCAACTTCCTTCTTCACTGTTTAACATATCTTCGTTGAGAGTCATAAATCTTCGCAACAACAACTTTAATGGGATTATTCCTGAGATGTGTCAGAATTTGAATTCATTAGAAATGATATCCCTTTCCAATAATAGGGTGGGAGGAAGCATTCCAAGGTCAATTGGAAACTGCACGTCTTTGAACAGGATATATTTCTCTGAGAACCTCCTCACAGGACATTTTCCATGGGAAATTGGAAATTTACAAAAACTACGAGAATTACATTTGGGTGAAAATAGCTTATATGGTTCGATCCCTTCAAATATACTCAACATCTCATCATTAGAGAGCTTATCATTGTCATATAATCAGTTATCTGGGAAGCTCCCAACCTACAGTTTTCAGATTCTCTCCAATATTGAAGCTCTCTACATTTCAAACAACAATCTCTTTGGAAGAGTTCCTGATAGCATCTTCAATGCTTCCAATCTTATTTATTTGGTACTTGCAAATAATTCATTCAGCGGGGCTATACCAGACGCAGTAGGCAACCTAAGAAAACTTGAACGTCTCAGCTTGGATGGAAACAAGTTCACTAGTGCTTCCAACACTTCAGAAATAAGCTTTCTTAAATCTCTGACAAATTGCAAGCGCTTGCAAAGGCTTATGCTATCTCTCAATCCTATACAAGGAGTTCTTCCTGACTCAATTGGCAATCTATCCAGTTCACTTTTAGTTTTTCAAGCAAGGAAATGTCAGATCAAAGGCCGAATTCCTCAAAGCATTGGAAGAATAAGCAGCTTGTATAATCTAAATCTGAATGGTAATGATTTAAGTGGACCAATTCCAACAAGCATTAAGGGACTAACCAGCCTGCAACGTTTGGATCTACGAAACAACAAATTACATGGTTCAATTACTGATGAGCTATGTCAAATGAAGAATTTGAGTGAGTTATTTCTAAGCAAGAATAAGCTTTCAGGACACCTTCCAGCGTGCATGGGAAGTCTCCATGCCCTGAGAAAGCTTTATTTGGACAATAACAATTTGAATGCAACAATACCCTCTAATCTTTGGAATCTGGAGGACATCTTGGAGGTCAATTTATCTCAGAATTCTTTTGTTGGTTTTCTACAAAATGAAATAGGTAGAATGAGAGCTCTTACAAAGTTGGATCTATCAAGGAATCAAATTTCAGGCAACATTCCCAGCAGCATTGGCAGATTGCAGGACTTGGAAAATCTTTCTTTGGAATATAACAAATTAGCAGGGCCTATACCTGAGTCATTTGGAAATCTGCTAAGCTTAGAATATTTAGACCTATCTAATAATGCTCTATCTGGGATGATTCCCAAGTCCCTTGAGAAACTTGTTTATCTCAACTATATCAATGTTTCTTACAATAGGTTACGAGGAGAAATTCCCAATGGTGGACCCTTTTTACGTTTCACTCCTCAATCATTTACAAACAATGAAGCACTATGTGGAGGACCCGTGAAAGATTCACCATGCCACACAAAACCCAGCAAGAAAGAGAGAGAAAAGCTGGCTCTGATAATAAGCATAACGTTTTTTGTGGCCGCAGTATTCATTGTATCCATTGTTGCCATTCTCTTAAGGTATAAAAGGAAGAAGGCTGCAGCAAGAAGAGCAATATGCTCCTCAACATTTGAGATAAGAAGGATTACCTATGAGGAAATTCTGAAAGCAACGGATAACTTTGATGAGAGCAATTTTCTTGGTATAGGAAGTTTTGGCACTGTTTACAAAGGGACACTTTCAAATGGGACAACAATAGCAATTAAGGTATTCAAATGTGATTCGGAAGCAGCGTTGAGAAGTTTTGATGTAGAATGTGAAGCGATGCGCAATCTTCGTCATCGGAATCTCATAAAAATCATCACTACTTGCTCCAATTCTGTTGATTTCAAAGCCTTAGTAATGGAATTCATGGCGGAAGGATGCCTGGAAAAATGGCTGTATTCCCAAGAACGCTACTTGAGCTTCAAGCAACGATTGGAAATCATGATAGATGTTGCCAATGCCCTAGAATATCTTCACAGCGGCAATTCAACTCCGGTTGTTCATTGCGATTTGAAGCCAAGCAACATTTTGTTGGATGAAGAACTTGTTGCTCGTCTAGCTGATTTTAGTATATCAAGACTCTTGTATCAAGGCCAGCTTCAAATACGGACAGTGACCTTGGGTACCTTTGGTTATGTTGCACCTGAATATGGATCAGAAGGGATTGTTTCAACGAAAGGTGATGTGTACAGCTATGGCATTTTACTAATGGAAATATTCACAAGAAAGAAGCCAACTGATGAAATGTTTATAGGAGAGCTGAGCTTGAAATCTTGGGTTGAGAAATCAATGCCTCATGAAGTGCTTCAAGTTGTGGACTCCAATTTGCTGCAGGAAGATGAATTGCAGGATGTGATAGATACGTTACCTATATATAGAATCATGAAATTGGCTTTGGATTGCTGTGCAGAATCCCCTGACCAAAGATTAAACATGCAAAATATTTTATGTGAGATCAAAATGATTAGAGAGGTTCTTTTGCAAGTGATTAGTGACAATCAGCTAACACATGAAGAGTGA 3579 0.3892 MSRLCFHFVFFILSVHYLLMADLVTCDLHDSIAMDESALVAFKASTIKDPHSFLFNNWSTSSPVCNWIGVTCDANQGRVIGLNLSNMGLVGTIPPHVGNLSFLIQLDLRKNSFHGHLPSELASLKRLKLLDLSFNNINGEVPPWIADLSQLQQLRLRNNKFSGIIPNALYNLSKLEILDCMANSIVGYIPPDIGRLTNLRLLRFQSNKLSGSLPATIFNISSLRQINFGYNALSGSFPAVILKIPTLERLVIGYNNFSGKLPEDMCHGLPKLKVLRISGNKFSGQLPSSLSQCEKLEHLYMNDNRFHGYIPTDIGKLTKLLEFSLTNNNLTGQLPSSLFNISSLRVINLRNNNFNGIIPEMCQNLNSLEMISLSNNRVGGSIPRSIGNCTSLNRIYFSENLLTGHFPWEIGNLQKLRELHLGENSLYGSIPSNILNISSLESLSLSYNQLSGKLPTYSFQILSNIEALYISNNNLFGRVPDSIFNASNLIYLVLANNSFSGAIPDAVGNLRKLERLSLDGNKFTSASNTSEISFLKSLTNCKRLQRLMLSLNPIQGVLPDSIGNLSSSLLVFQARKCQIKGRIPQSIGRISSLYNLNLNGNDLSGPIPTSIKGLTSLQRLDLRNNKLHGSITDELCQMKNLSELFLSKNKLSGHLPACMGSLHALRKLYLDNNNLNATIPSNLWNLEDILEVNLSQNSFVGFLQNEIGRMRALTKLDLSRNQISGNIPSSIGRLQDLENLSLEYNKLAGPIPESFGNLLSLEYLDLSNNALSGMIPKSLEKLVYLNYINVSYNRLRGEIPNGGPFLRFTPQSFTNNEALCGGPVKDSPCHTKPSKKEREKLALIISITFFVAAVFIVSIVAILLRYKRKKAAARRAICSSTFEIRRITYEEILKATDNFDESNFLGIGSFGTVYKGTLSNGTTIAIKVFKCDSEAALRSFDVECEAMRNLRHRNLIKIITTCSNSVDFKALVMEFMAEGCLEKWLYSQERYLSFKQRLEIMIDVANALEYLHSGNSTPVVHCDLKPSNILLDEELVARLADFSISRLLYQGQLQIRTVTLGTFGYVAPEYGSEGIVSTKGDVYSYGILLMEIFTRKKPTDEMFIGELSLKSWVEKSMPHEVLQVVDSNLLQEDELQDVIDTLPIYRIMKLALDCCAESPDQRLNMQNILCEIKMIREVLLQVISDNQLTHEE* 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01243 1192 SMART serkin_6 899 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01243 1192 FunFam Leucine-rich repeat receptor-like protein kinase TDR 235 482 - -
Pte13g01243 1192 SMART LRR_sd22_2 758 779 - -
Pte13g01243 1192 SMART LRR_sd22_2 196 222 - -
Pte13g01243 1192 SMART LRR_sd22_2 710 742 - -
Pte13g01243 1192 SMART LRR_sd22_2 124 150 - -
Pte13g01243 1192 SMART LRR_sd22_2 437 467 - -
Pte13g01243 1192 SMART LRR_sd22_2 510 531 - -
Pte13g01243 1192 SMART LRR_sd22_2 662 688 - -
Pte13g01243 1192 SMART LRR_sd22_2 317 343 - -
Pte13g01243 1192 SMART LRR_sd22_2 614 643 - -
Pte13g01243 1192 SMART LRR_sd22_2 365 391 - -
Pte13g01243 1192 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Pte13g01243 1192 SUPERFAMILY RNI-like 287 564 - -
Pte13g01243 1192 Gene3D Transferase(Phosphotransferase) domain 1 976 1188 - -
Pte13g01243 1192 Gene3D Phosphorylase Kinase; domain 1 879 975 - -
Pte13g01243 1192 ProSiteProfiles Protein kinase domain profile. 899 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01243 1192 Pfam Protein kinase domain 901 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01243 1192 SUPERFAMILY L domain-like 47 357 - -
Pte13g01243 1192 FunFam Serine-threonine protein kinase plant-type 879 975 - -
Pte13g01243 1192 SUPERFAMILY Protein kinase-like (PK-like) 879 1178 IPR011009 -
Pte13g01243 1192 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 537 833 - -
Pte13g01243 1192 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 976 1184 - -
Pte13g01243 1192 SUPERFAMILY L domain-like 569 823 - -
Pte13g01243 1192 Gene3D Ribonuclease Inhibitor 530 838 IPR032675 -
Pte13g01243 1192 Pfam Leucine rich repeat 464 523 IPR001611 GO:0005515
Pte13g01243 1192 Pfam Leucine rich repeat 737 795 IPR001611 GO:0005515
Pte13g01243 1192 Pfam Leucine rich repeat 245 306 IPR001611 GO:0005515
Pte13g01243 1192 Pfam Leucine rich repeat 664 723 IPR001611 GO:0005515
Pte13g01243 1192 Pfam Leucine rich repeat 320 377 IPR001611 GO:0005515
Pte13g01243 1192 Pfam Leucine rich repeat 592 651 IPR001611 GO:0005515
Pte13g01243 1192 FunFam Leucine-rich repeat receptor-like kinase 36 143 - -
Pte13g01243 1192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1019 1031 IPR008271 GO:0004672|GO:0006468
Pte13g01243 1192 SMART LRR_typ_2 710 734 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 662 686 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 196 220 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 269 293 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 124 147 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 342 364 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 148 171 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 462 486 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 510 533 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 317 341 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 614 638 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 413 436 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 758 781 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 437 461 IPR003591 -
Pte13g01243 1192 SMART LRR_typ_2 365 389 IPR003591 -
Pte13g01243 1192 PRINTS Leucine-rich repeat signature 758 771 - -
Pte13g01243 1192 PRINTS Leucine-rich repeat signature 713 726 - -
Pte13g01243 1192 Gene3D Ribonuclease Inhibitor 243 529 IPR032675 -
Pte13g01243 1192 Gene3D Ribonuclease Inhibitor 25 85 IPR032675 -
Pte13g01243 1192 Gene3D Ribonuclease Inhibitor 86 242 IPR032675 -
Pte13g01243 1192 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 144 234 - -
Pte13g01243 1192 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 533 1173 - -
Pte13g01243 1192 ProSitePatterns Protein kinases ATP-binding region signature. 905 927 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01243 Pte-Chr13 19919955 19926735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01243 38 1176 Receptor kinase-like Gene Family AT5G46330 32.790 4.91e-178 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pte13g01243 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01243 - K13420 qsa:O6P43_012786 1038.87