Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01239 ATGAGCTCAGTTCAGAAGAACTCCAAGCTTACCTTGAGAAGAACAAGGAGAGGAAGACAGAGAAGAATTATGTCGAGGGTACACCGCTCTCAAGCTCGCTGTTGCAGAGGGGGAAGCAGAAAGTTCAAAAGTGGCAAGAGCAAATTGAGCAACAGTGGATCTTCTAAGGTCTCAGAAAGGTTGGAGGCACTTAAGAATCTCATCCCAAATCATCAAAATGGTGAAATAGTAAAAGCTGAACAGTTGTTCCAAGAAACAGCGAGTTACATTGTTACGCTCAGGACGCAGGTTATGGTTTTGCAGAAACTGATAGAGTATTACGGTAGCAGCAGGACAGAGAAAGAGGAAGAACATGCTGCAACCTCATAG 369 0.4417 MSSVQKNSKLTLRRTRRGRQRRIMSRVHRSQARCCRGGSRKFKSGKSKLSNSGSSKVSERLEALKNLIPNHQNGEIVKAEQLFQETASYIVTLRTQVMVLQKLIEYYGSSRTEKEEEHAATS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01239 122 MobiDBLite consensus disorder prediction 10 43 - -
Pte13g01239 122 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 11 109 IPR044660 GO:0006355
Pte13g01239 122 MobiDBLite consensus disorder prediction 1 56 - -
Pte13g01239 122 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 108 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01239 Pte-Chr13 19674834 19675510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01239 21 105 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43060 34.884 7.48e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01239 - - qsa:O6P43_009144 95.1301