Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01232 ATGGCGCGTACTGGAGATTCTGTGTCTGCAACACCACCACGTCCTGCAATAACATTACCATCTCCGCCTTCCATGGAGACTATCTTCTCCGGTGGATTTGGTGCAAGCCCAGGTCCTATGACTCTTGTCTCTAACTTCCTCTCTCATGACAGCAACTGCTCCTTTTCTCAGTTACTTGCTGGTGCCATGGCTTCTCCTATTGCTCATGCTGTTAGGCCTACCAGTTTTTATCCGGAGAGTTACATGGATAACTCTGGTAAAGAAAAGGGTTACGGGGAAGCCGTTGATGAGGAGTTGGGGTTCCGGCAAAGTAGGCCCATGAGTTTGCCGGTTGCTCGTTCACCAACGTTTACAATCCCACCTGGGTTGAGTCCTTCTGGTTTGCTCAATTCTCCGGGATTTTTTTCTTCCCATTATCCATTTGGGATGTCCCATCAGCATGCTCTAGCACAGGTAACAGCTCAAGCTGTGCTAGCACAAGAACCTCAGATGCATTCGCAAGCTGATGACCAGCCTCCTACAATCACGGCACCCTCTGAGACTTTGTCTCGTCAGTCTTCACTTAATCCCAGTGCAGGCTCTGGCCTCCAGGTGGTACCGTCAACATCAAATCCTACAATGGCAGAAATTGAATCAGCTGAGGCTTCTCAAGCCAATAAGAAATATCAATCGAGTACATTATTTGTTGACAAGCCAGCAGATGACGGCTATAACTGGCGCAAATATGGGCAAAAGCAAGTCAAAGGGAGTGAGTATCCAAGAAGTTACTACAAGTGCACTCAATTGAATTGCCTCGTGAAGAAAAAGGTTGAGCGTTCCCCTGAGGGCCAAATAACTGAGATTATCTATAAGGGCCAGCATAACCATGAGGTCCCACAACAATCTAAACGGGTGAATCTAGACATTCAAGCTGAAAGTGACATTGTGCATGCTGACTCAGTGCCAGCAGGTTTAGGTTCTAATCAGGAGTTCTTTGTGCAATTACCTGGATCAAGTGATAGTGAAGAGGCTTGTGGTGCTGACAAGAGAGGAAAAGAGGACAATCGTTGCGAACCACCTGCAAAGAGGAGGAATATTGAATCTGTGGTTTCTGAATTATCCGTGTCACAAAATACCATAACTGAACCAAAAGTCATTGTGCAAACTAGGAGTGTAATTGATCTTTTAGATGATGGCTACAGATGGCGCAAATATGGACAAAAGGTGGTGAAGGGAAATCCTTACCCGAGGTGA 1233 0.4631 MARTGDSVSATPPRPAITLPSPPSMETIFSGGFGASPGPMTLVSNFLSHDSNCSFSQLLAGAMASPIAHAVRPTSFYPESYMDNSGKEKGYGEAVDEELGFRQSRPMSLPVARSPTFTIPPGLSPSGLLNSPGFFSSHYPFGMSHQHALAQVTAQAVLAQEPQMHSQADDQPPTITAPSETLSRQSSLNPSAGSGLQVVPSTSNPTMAEIESAEASQANKKYQSSTLFVDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTQLNCLVKKKVERSPEGQITEIIYKGQHNHEVPQQSKRVNLDIQAESDIVHADSVPAGLGSNQEFFVQLPGSSDSEEACGADKRGKEDNRCEPPAKRRNIESVVSELSVSQNTITEPKVIVQTRSVIDLLDDGYRWRKYGQKVVKGNPYPR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01232 410 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 MobiDBLite consensus disorder prediction 332 354 - -
Pte13g01232 410 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 130 410 IPR044810 GO:0003700
Pte13g01232 410 Gene3D WRKY domain 218 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 SUPERFAMILY WRKY DNA-binding domain 382 410 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 ProSiteProfiles WRKY domain profile. 384 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 SUPERFAMILY WRKY DNA-binding domain 231 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 Pfam WRKY DNA -binding domain 390 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 FunFam WRKY transcription factor 219 293 - -
Pte13g01232 410 MobiDBLite consensus disorder prediction 336 354 - -
Pte13g01232 410 Gene3D WRKY domain 376 410 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 ProSiteProfiles WRKY domain profile. 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01232 410 MobiDBLite consensus disorder prediction 1 23 - -
Pte13g01232 410 MobiDBLite consensus disorder prediction 162 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01232 Pte-Chr13 18081993 18086213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01232 14 410 WRKY Transcription Factor Family AT2G03340 48.471 2.26e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte13g01232 WRKY 5.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01232 - - jre:108985955 447.588