Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01230 ATGTACGGATTCGAAGCACTCACCTTCAACATTCATAGTGGGTATTTGGAGGCAATCGTCAGGGGACACCGAGCTGGGTTGCTTACTGCTGCTGATTACAACAATTTATGCCAATGCGAGACCCTTGATGACATCAAAATGCACCTCTCTGCTACGGAGTATGGTCCATATCTCCAAAATGAACCTTCCCCATTGCATACAACTACTATTGTCGAGAAATGCACCCTAAAACTGGTTGATGACTATAAGCACATGCTATTCCAGGCCACAGAGCCCCTGTCCACATTCTTAGAATATATAACATATGGTCACATGATAGACAATGTTGTTTTGATTGTCACTGGGACGTTACATGAGAGAGATGTTCAGGAGTTACTTGAAAAATGCCACCCTTTGGGCATGTTTGACAGCATTGCTACCCTCGCTGTTGCTCAGAATATGAGGGAGCTTTATAGGCTAGTCCTCGTTGACACTCCCCTGGCTCCATACTTCTCTGAATGCATTACATCAGAGGATTTGGATGACATGAATATTGAAATAATGAGGAACACTCTCTACAAGGCATACCTGGAGGACTTTTACAGATTTTGTCAAAAACTTGGAGGTGCTACTGCTGAGATTATGTCTGACCTCCTAGCCTTTGAGGCTGATCGAAGGGCTGTCAGCATCACGATTAATAGTATTGGTACTGAGCTTACAAGAGATGACCGTAGAAAATTGTATTCTAATTTTGGTCTACTCTATCCTTATGGTCATGAAGAACTTGCTGTCTGTGAGGACAATGATCAGGTTAGGGGTGTCATGGAGAAATATCCTCCATATCAATCAATTTTTGCCAAATTATCATATGGAGAAAGCCAGATGCTTGACAAGGCATTCTACGAAGAAGAGGTGAAGAGGCTATGCTTAGCATTTGAGCAACAGTTCCATTTTGGCGTTTTCTTCGCGTACATGAGATTAAGGGAGCAGGAGATAAGAAATCTAATGTGGATCTCAGAATGCGTGGCTCAGAATCAAAAGTCAAGAGTTCATGATAGTGTTGTCTTCATATTTTAG 1056 0.4223 MYGFEALTFNIHSGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLFQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVSITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDNDQVRGVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHFGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01230 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Pte13g01230 351 Gene3D - 206 309 IPR035067 -
Pte13g01230 351 Gene3D - 91 199 IPR035067 -
Pte13g01230 351 FunFam V-type proton ATPase subunit 91 205 - -
Pte13g01230 351 FunFam V-type proton ATPase subunit 14 128 - -
Pte13g01230 351 SUPERFAMILY V-type ATP synthase subunit C 14 349 IPR036079 -
Pte13g01230 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
Pte13g01230 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Pte13g01230 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Pte13g01230 351 FunFam V-type proton ATPase subunit 206 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01230 Pte-Chr13 17996411 17999529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01230 1 352 Primary Pumps ATPases(2) AT3G28710 92.898 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01230 K02146 - csv:101203260 698.738