Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01223 ATGGCAGCCCACAAACATTCGTTGAAAATAATAGAAGTTGACTACATTCGTTCGTCATCTTCATCTTCTGTGACTGAATCATCTGTGCCTCTCACTTTTTTTGATTTATTGTGGTTCAGATTTCATCCAGTTGAGCGTGTGTTCTTCTATTCGCTTCCTGGAGAAGATGATGATTCTTACTTCTTTCATTTTGTAGTTCCTAAACTCAAAGATTCACTCTCTCTCACCCTCCAATACTTTCTCCCCCTTGCTGGGAACATCATTTGGCCTCAAGAATCAGAAAAGCCCTTCATCAAACATAATCCAGGAGATGGAGTTTCATTCACTGTAGCACAGTCTCATGCAGACTTCAAAAACATCTCAAACTATGATTCCTATGACGCGTCAGAGTCTCGTGCCTTAGTACCCCACTTGCACATATCTGAAAGCAGTGCTTCTATACTGGCTCTGCAGGCGACTTTGTTTCCCAAGAGAGGTTTTTCCGTTGGTATTGCAACCCACCACGCAATCCTCGATGGGAAATCTTCAACAATGTTTATGAAGATATGGGCCTATTTATGCAAAGAGAGCAAGAAATCGAACAAGTCCTCTTTGCCGAAAGAGCTGAGGCCATGCATTGATCGTAGTGTTATCAAGGACCCAAAGGGTCTTGATGTGAAATATCTGAATTCATGGGCCAAAATGTTCATTGCAGCTGGCTCGGTTGTCAACCTTGCCGATAGAAGTGTTCAAATCTTGCCTGAATTTACCGGGACTGGAAACCAGGAATTATTGCAAACAACATTCACGTTGAACCGCGCAGATATTGAGAATTTGGGGAAGAGGGTCCTATCGCTTTGGGACAAGGTGAGCAAAGAGGAAGAGAATACAGAAAAGCCAGTGAAGCTGTCAACGTTTGTGCTTACTTGTGCTCATGTGCTGGTTTGCATAGCTAAAGCTATACTACTGGAAGAAAGCAGGAAGATTATATTTGGATTCCTAGCTGATTGCAGAGAAAGGCTAGAGCCACCTATTGATCCAAATTATTTAGGTAATTGCGCTTCTGCTTGTTTGACAATCATAGATCACGAAGAAATTTACAGTGATGATGGGGTAGCCTTTGTTTCCAAGAAAATCTACGAGGAAATAGAGAGTTTAAAGAAGGATGCACTGGGTAGAATGGAGTATGCACTTGAAGTTTGGAATTCTGCGGCATTAGCTGGGCATCGGATTATAGGGGTAGCAGGATCGCCACGTTTTGGGGTTTATGAGACAGATTTTGGATGGGGAAAACCGGACAAGGTGGAGATACCATCAGTTGGTACAAATGGATCGATTGCGTTAGCTGAAAGCAGGGATGGAAATGGAGTTGAAGTTGGTTTGGTTTACCCCAAGCATGAGATGGACCTCATTGCTGCTGCTTTCTACCAGGGCCTGCAGGCATAG 1425 0.433 MAAHKHSLKIIEVDYIRSSSSSSVTESSVPLTFFDLLWFRFHPVERVFFYSLPGEDDDSYFFHFVVPKLKDSLSLTLQYFLPLAGNIIWPQESEKPFIKHNPGDGVSFTVAQSHADFKNISNYDSYDASESRALVPHLHISESSASILALQATLFPKRGFSVGIATHHAILDGKSSTMFMKIWAYLCKESKKSNKSSLPKELRPCIDRSVIKDPKGLDVKYLNSWAKMFIAAGSVVNLADRSVQILPEFTGTGNQELLQTTFTLNRADIENLGKRVLSLWDKVSKEEENTEKPVKLSTFVLTCAHVLVCIAKAILLEESRKIIFGFLADCRERLEPPIDPNYLGNCASACLTIIDHEEIYSDDGVAFVSKKIYEEIESLKKDALGRMEYALEVWNSAALAGHRIIGVAGSPRFGVYETDFGWGKPDKVEIPSVGTNGSIALAESRDGNGVEVGLVYPKHEMDLIAAAFYQGLQA* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01223 474 PANTHER - 8 473 - -
Pte13g01223 474 Gene3D - 8 235 IPR023213 -
Pte13g01223 474 Gene3D - 254 474 IPR023213 -
Pte13g01223 474 Pfam Transferase family 21 468 - -
Pte13g01223 474 SUPERFAMILY CoA-dependent acyltransferases 294 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01223 Pte-Chr13 15201353 15203209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01223 35 425 Monolignol Biosynthesis Gene Families AT5G48930 24.752 1.77e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01223 - - qsa:O6P43_004395 467.618