Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01218 ATGGAGAGCTCAGAAGAGAAGGTAGTTGCTGTTATCATGGTTGGAGGACCCACCAAAGGAACAAGATTTCGGCCTCTTTCATTCAACACCCCAGAGCCCCTGTTTCCTTTGGCCGGACAGCCAATGGTTTATCATCCTATTTCTGCCTGCAAAAGGATACCACGTTTGGCTCAAATATTTCTTATTGGCTTCTATGAAGAGCGTGAATTTGCACTATATGCTTCTTCAGTTTCAACTGAACTGAAAGTACCAGTAAGATATTTAAAGGAGGACAAACCACATGGCTCAGCTGGTGGCCTTTATTACTTCAGAGATATGATAATGGAAGAATGCCCTTCACATATATTTCTGCTAAACTGCGATGTTTGCTGCAGTTTTCCACTGCCAGACATGCTTGAAGCTCATAAGAGATACGGCGGGATGGGTACAATGTTAGTAATTAAGGTTTCTGCTGAATCTGCCAGCCAATTTGGTGAGTTAATTGCTGATCCTACCACCAAAGAATTGTTGCATTATACTGAGAAACCTGAGACTTTTGTGAGTGATTTGATAAATTGCGGCATCTATGTTTTTACTCCTGATATCTTCACTTCCATTCAAAGTGTTTCCACTAATCGGGAAGATAGAGCTAATCTACGTCGTCTCTCCAGCTTTGAGGCCCAGTTGTCGACAAGAACCCTTCCAACTGATTTTGTAAGACTGGACCAAGACATTTTGTCACCTTTAGCGGGAAAGAAACAATTATATACATATGAAACCATGGATTTCTGGCAGCAGATCAAGACCCCAGGTATGTCACTGAGATGCTCCGGTTTGTATCTCACCCATTTCCGGAACACCTTGCCTAATGTGTTGGCCAGTGGCGATGGTACAAAATGGGCTACTGTCGTTGGTGATGTTTATGTTCATCCCTCTGCAAAAGTCCATCCGATGGCAAAGATTGGTCCCAATGTTTCTATATCAGCAAATGTCCGCATAGGTTCAGGGGTGAGGTTAATCAATTGTATTATCTTGGATGACGTTGAGGTCAAGGAAAACGCCGTAATTATAAATTCAATCGTTGGGTGGAAATCATCAATTGGGAAATGGTCACGTGTTCAGGCTGAAGGAGACTACAACGCAAAGCTTGGGATAACCCTTCTCGGAGAAGCCGTCACTGTCGAAGATGAAGTTGTGGTGATCAATAGCATTGTCCTACCAAATAAGACCCTCAATGTTAGCGTACAAGAGGAAATTATTTTGTAA 1245 0.4265 MESSEEKVVAVIMVGGPTKGTRFRPLSFNTPEPLFPLAGQPMVYHPISACKRIPRLAQIFLIGFYEEREFALYASSVSTELKVPVRYLKEDKPHGSAGGLYYFRDMIMEECPSHIFLLNCDVCCSFPLPDMLEAHKRYGGMGTMLVIKVSAESASQFGELIADPTTKELLHYTEKPETFVSDLINCGIYVFTPDIFTSIQSVSTNREDRANLRRLSSFEAQLSTRTLPTDFVRLDQDILSPLAGKKQLYTYETMDFWQQIKTPGMSLRCSGLYLTHFRNTLPNVLASGDGTKWATVVGDVYVHPSAKVHPMAKIGPNVSISANVRIGSGVRLINCIILDDVEVKENAVIINSIVGWKSSIGKWSRVQAEGDYNAKLGITLLGEAVTVEDEVVVINSIVLPNKTLNVSVQEEIIL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01218 414 CDD M1P_guanylylT_A_like_N 10 273 - -
Pte13g01218 414 Pfam Nucleotidyl transferase 10 235 IPR005835 GO:0009058
Pte13g01218 414 Gene3D Hexapeptide repeat proteins 286 411 - -
Pte13g01218 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 8 356 IPR029044 -
Pte13g01218 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 275 IPR029044 -
Pte13g01218 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 414 - -
Pte13g01218 414 FunFam Mannose-1-phosphate guanyltransferase alpha 7 277 - -
Pte13g01218 414 FunFam Putative GDP-mannose pyrophosphorylase 283 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01218 Pte-Chr13 15073261 15077339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01218 20 358 Eukaryotic Initiation Factors Gene Family AT2G34970 22.021 1.46e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01218 K00966 - mnt:21393802 746.117