Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01215 ATGCTAGCTGGAGATCCTCAGTTTCTGCAGATCAAGGCATGCATGAACAGATTGCCAATATTCAACACCACTAGGTATGACTCAAATCCTTTTGTTTTCATAATGTTTCCTTATCATCGAGATATACATGTAGTGCTTTCTGTATTTCAGAATCTGCTAGAGCAGAGTGGAGTTTTCATTAAGATAAGAGAAATGAATAAGAGAAGAGGTATCGTCGACGTGGGATCGATTTTCATGCATGCAGATAGAGCGGATTGGTTACTGATGGGTTTAGGCTTGTTTGGATGCGTTGCTGATGGAGTTTCTAAGCCACTGGCACTGCTCATTATTAGTATCTTAATGAACAACATAGGAAATGTATCAACCTTGGACCCAGATGAGTTAAGGCATAGCATCAACAAGAATGCGTTGATAATGGTGTACCTGGCTTGTGCGTCGTTTCTTTCATGCTTCATCGAGGGTTACTGTTGGACAAGAACAGCGGAGAGACAAGCAGCCAGAATAAGAGTTAAGTATCTCAAAGCAGTGCTAAGGCAAGATGTGAGCTACTTTGACTCGAATATCACAAGCACATCAGAGGTCATCACCTGTGTCTCTCATGACAGTATCTTAATTCAGGATGTTCTTAGTGAAAAGGTACCAAACTTTTTAACGAACTGCTCGAATTTCATTGGAAGCTATGTAGTCTCATTCATAATGTTGTGGAAGCTGGCCATTGTGGGGTTCCCTTTTGTGGTTCTCCTCATCATACCTGGTCTATTGACTGGGAGGGCTCTAATAGGATTGGCTAGAAAAATCAGTTCAGAGTACAATCACGCAGGGAGAGTAGCAGAGCAGGCAGTATCTTCTATCAGAACTGTTTATGCTTTTGTAGCAGAAAAGAAAACCATAGCTGCTTTCTCTTCAGCTCTGCAAGACTTGGTCAAGCTGGGGTTGATACAAGGCTTGGTTAAAGGAATAGCCATTGGAAGCAATGCTGTAGTCTTTGCTATTTGGTCTTTCATGTCATACTATGGCAGCAGATTGGTCATGTACCATGGTGCCAAAGGAGGAACTGTTTTTGCAATAATATCTGCCATTATTACTGGAGGACTGTAA 1098 0.4171 MLAGDPQFLQIKACMNRLPIFNTTRYDSNPFVFIMFPYHRDIHVVLSVFQNLLEQSGVFIKIREMNKRRGIVDVGSIFMHADRADWLLMGLGLFGCVADGVSKPLALLIISILMNNIGNVSTLDPDELRHSINKNALIMVYLACASFLSCFIEGYCWTRTAERQAARIRVKYLKAVLRQDVSYFDSNITSTSEVITCVSHDSILIQDVLSEKVPNFLTNCSNFIGSYVVSFIMLWKLAIVGFPFVVLLIIPGLLTGRALIGLARKISSEYNHAGRVAEQAVSSIRTVYAFVAEKKTIAAFSSALQDLVKLGLIQGLVKGIAIGSNAVVFAIWSFMSYYGSRLVMYHGAKGGTVFAIISAIITGGL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01215 365 PANTHER ABC TRANSPORTER B FAMILY 71 364 IPR039421 -
Pte13g01215 365 Pfam ABC transporter transmembrane region 91 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01215 365 Gene3D ABC transporter type 1, transmembrane domain 94 365 IPR036640 GO:0005524|GO:0016020
Pte13g01215 365 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 91 365 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01215 365 CDD ABC_6TM_Pgp_ABCB1_D1_like 89 365 - -
Pte13g01215 365 SUPERFAMILY ABC transporter transmembrane region 80 361 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01215 Pte-Chr13 15045970 15050062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01215 76 365 Calmodulin-binding Proteins AT2G36910 35.395 6.08e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01215 K05658 - fve:101310339 423.705