Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01209 ATGGATGCTTTTGCTGGAAATAGTGGCCTTTGTGGGGGCCCTGTTGGATCAAAGTGTGGCGGGTTGAGTAAGAAGAATCTGGCGATCATTATAGCTGCCGGGGTGTTTGGTGCTGCCGCTTCCTTGTTATCAGCTTTTGGCTTGTGGTGGTGGTACCATGTAAGATTGAGCACGAACAAGAAGAGTGGATATGGAACTGGAACTGGTGCAGATTGGGCTGACAGGTTAAGGGGTTATAGGCTTGTTCAAGTATCTTTATTTCAGAAACCATTAGTGAAGGTTAAGTTAGGTGATCTGATGGCAGCGACTAATAATTTTAGCCCAGAAAATATTGTAATTTCGACGAGGACGGGTAGTACATACAAGGCTGATCTTTCTGATGGATCAGCACTCGCAATCAAGAGGCTTAATACTTGTAAGCTTGGGGACAAGCAATTTCGTACGGAGATGCATAGATTGGGGCAGCTCAGACACCCCAATTTGGCACCGCTCCTGGGGTTCTGTGTTGTAGAAGAGGAAAAGTTTCTTGTTTATAAACATATGGCTAATGGAACTCTGTATTCATTGTTGTATAACCATGGGGCTCTGTTGGATTGGTCCACCAGATTTAAGATCGGGTTAGGTGCTGCTAGAGGTCTTGCTTGGCTGCACCATGGATGCCATCCTCCAATCATTCACCAAAACATTTGTTCCAATATCATCCTTGTAGATGAAGACTTTGATGCTAGACTGATGGATTTTGGATTGGCTAGACTGATGGCTTCTGACTCTAATGGCAGTAGTTATGTCAATGGGGATTTAGGGGAACTTGGATACATAGCTCCCGAGTATCCAAGCACCATGGTTGCTTCCCTTAAAGGAGATGTGTATGGATTTGGGATAGTGCTTTTAGAGTTGATCACTGGGCAAAGACCTCTTGACGTTAGCAAAGCAGATGAAGGATTTAAGGGCAATTTAGTGGATTGGGTAAATATGCTTTCAACTTCTGGGAGAATCAAAGACTGTATTGACATGACAATAAGTGGTAAGGGACATGACGAGGAAATTTTGCAGTTTCTTAAAATGGCAAGCAATTGTGTGATTTCTCGGCCCAAGGAGAGGTGGTCAATGTACCAGGTTTATCAATCATTGAGGAATATGTCCAAAGATCAAAACTTTCCTGAACAGGATGAGGAGTTTCCATTGCTCTTTGGGAAGCCAGATAATGGACCAGCATAG 1218 0.4368 MDAFAGNSGLCGGPVGSKCGGLSKKNLAIIIAAGVFGAAASLLSAFGLWWWYHVRLSTNKKSGYGTGTGADWADRLRGYRLVQVSLFQKPLVKVKLGDLMAATNNFSPENIVISTRTGSTYKADLSDGSALAIKRLNTCKLGDKQFRTEMHRLGQLRHPNLAPLLGFCVVEEEKFLVYKHMANGTLYSLLYNHGALLDWSTRFKIGLGAARGLAWLHHGCHPPIIHQNICSNIILVDEDFDARLMDFGLARLMASDSNGSSYVNGDLGELGYIAPEYPSTMVASLKGDVYGFGIVLLELITGQRPLDVSKADEGFKGNLVDWVNMLSTSGRIKDCIDMTISGKGHDEEILQFLKMASNCVISRPKERWSMYQVYQSLRNMSKDQNFPEQDEEFPLLFGKPDNGPA* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01209 405 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 67 180 - -
Pte13g01209 405 SUPERFAMILY Protein kinase-like (PK-like) 84 377 IPR011009 -
Pte13g01209 405 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 181 399 - -
Pte13g01209 405 Gene3D Phosphorylase Kinase; domain 1 66 180 - -
Pte13g01209 405 ProSiteProfiles Protein kinase domain profile. 106 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01209 405 CDD STKc_IRAK 114 377 - -
Pte13g01209 405 Gene3D Transferase(Phosphotransferase) domain 1 181 397 - -
Pte13g01209 405 Pfam Protein tyrosine and serine/threonine kinase 126 320 IPR001245 GO:0004672|GO:0006468
Pte13g01209 405 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01209 Pte-Chr13 14506730 14509018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01209 2 402 Receptor kinase-like Gene Family AT3G28450 66.832 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pte13g01209 PK_Tyr_Ser-Thr 3.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01209 - - qsa:O6P43_009034 671.774