Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01200 ATGTGTTGCAAGATCAGAAGTGGGAGCCTATTCCTTGGAAGAAGCTGCAGGTTGGAGATTATTGTTAAGGTTAAGCAGGACGCATTCTTCCCTGCAGACCTTCTTTTCCTTGCTAGTACCAACCCTGATGGCGTTTGCTATATAGAGACAGCAAATTTGGATGGAGAGACCAATTTGAAGATCAGGAAAGCCTTGGAGAAGACTTGGGATTACTTGACACCTGAGAAGGCATCAGAATTTAAAGGTGAAGTGCAGTGTGAACAGCCAAACAACTCGTTGTATACTTTCACTGGCAATCTTATCATTCAAAACCAGACATTGCCTATATCGCCGAACCAGATTTTGTTACGAGGATGCAGCCTCAGAAATACAGAGTACGTTGTTGGCACTGTTATCTTTACAGGACATGAAACAAAGGTTATGATGAATTCCATGAATGTACCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTCCTACTCTTTGGTGTTCTATTGACGATGTGTGTCATTGGTTCCATTGGCAGTGGGGTTTTTGTGAATGAGAAGTATTACTACCTACAACTTGCAGATGGGGGTGACAGCCAGTTCAACCCAAAAAATAGATTTGTGGTTGTTATTCTGACTATGTTTACACTTATCACATTGTACTCTACAATCATTCCCATTTCACTTTATGTGTCCATTGAGATGATCAAGTTTATCCAGTCTACTCAATTCATCAACAAGGACTTGGCAATGTACCATAAAGAGTCTGACACCCCAGCATTGGCTAGGACATCCAATCTAAATGAGGAACTTGGGCAGATAGAATACATATTTTCGGATAAAACTGGAACTTTGACGAGAAACCTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTCTATGGAACTGGGATAACTGAAATTGAAAGAGGAGTAGCACAACGGAATGGCATGAAACTTGAGGAAAATACACCGGAAAATGCAAGACGCGACAAGGGGTTTAACTTTGATGATGCTAGGCTTATGAGTGGAGCCTGGAGAAATGAAGCCAATCCTGAGATGTGCAAGGAATTCTTCAGATGCCTGGCCGTTTGTCATACTGTGCTTCCTGAGGGTGACGAATCACCTGAGAAAATTAAATACCAAGCCGCATCCCCAGATGAAGCTGCTTTGGTCACTGCTGCGAAGAACTTTGGTTTCTTCTTTTACAGACGCACACCTACTGCAATTTATGTTCGCGAATCTCATGTTGAGAAAATTGGTAAAACCCAAGATGAAGTGTACGAGATTCTGAATGTTCTGGAGTTCAACAGTGTAAGGAAGCGCCAGACTGTTGTTTGTCGTTATCATGATGGAAGGCTTGTTTTGTACTGCAAGGGTGCTGATACTGTTATCTATGAGAGACTGGCTGGAGGTCAAAATGATATGAAGAAAGTGACGAAGGAATACTTGGAACAGTTTGGTTCTGCTGGACTGCGAACCCTATGCCTGGCCTATAAAGATTTAAGTCCTGCTGTATATGAAAGTTGGAACGAGAAGTTTGTCCAGGCTAAGTCTTCCCTTCGAGATCGTGAGAAAAAGTTAGATGAGGTTGCTGAACTCATAGAAAATGATCTTATTCTGATTGGGTCGACTGCCATAGAAGACAAACTTCAGGAAGGAGTACCAGACTGTATCCAGACACTGTCAAGAGCTGGAATTAAAATTTGGGTCCTAACAGGAGACAAGATGGAAACAGCAATAAACATAGCATATGCATGCAACCTGATCAATAATGAAATGAAGCAGTTTGTTATCAGTTCGGAAACTGATGCTATAAGAGAAGTTGAAGACAGAGGTGATCAAGTGGAAATTGCACGCTTCATCAAAGAAGAAGTGAAGAGAGAGCTGCAGAAGTACCTTGATGAACAACAACTGCTCCTAAACACTCTATCTGGACCAAAACTAGCACTTTTGTATGCTGCCGAGTTTCCCCGCTTCAGAAGGCTCAGGTTAACAACACTGGTTAAGAAAGGTGCTAACAAGATAACACTTAGTATTGGTGATGGTGCCAATGATGTCAGCATGATTCAAGCTGCCCATGTCGGTGTTGGTATAAGTGGGCTTGAAGGGATGCAAGCAGTCATGGCTAGTGACTTTGCTATTGCTCAATTTCGTTTTCTTGCAGACTTACTTCTTGTTCATGGACGCTGGTCTTACATCAGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTAACGTTCACTCTCACTCAGTTCTGGTTTACTTTTCAAACTGGATTCTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCTTTATATAATGTCATTTTCACAGCCCTGCCTGTGGTTGTTGTTGGACTCTTTGATAAGGAGAATATATATTTTGTTATATTCGTCTTGATGAGCACATTCTACTTCTACTTCACCCTTCTTCTAGTCCCTATTTTTGCACTATTTGGTGACTTCATTTATCTTGGGGTTCAAAGATGGTTCTTCCCTTATGATTACCAGATTATTCAAGAGATGCACAGGAATGATGCTGATAACTATGGCAGAGCACAATTGCTAGAGATTGAGAATCGGCTTACTCCAGCTGAAGCTAGGAGCTTCGCCATTGCGCAACTTCCACGGGAAGGGTCGAAGCACACTGGCTTTGCTTTTGACTCACCTGGGTATGAATCATTTTTTGCTGCACAGCTAGGCATACATGCTCCACAAAAAGCGTGGGATGTCGCAAGGAGAGCCAGTATGAGGTCTAAACAGAAGAAAGCCCCTAAATAG 2796 0.4202 MCCKIRSGSLFLGRSCRLEIIVKVKQDAFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIIQNQTLPISPNQILLRGCSLRNTEYVVGTVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILLLFGVLLTMCVIGSIGSGVFVNEKYYYLQLADGGDSQFNPKNRFVVVILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLAMYHKESDTPALARTSNLNEELGQIEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGVAQRNGMKLEENTPENARRDKGFNFDDARLMSGAWRNEANPEMCKEFFRCLAVCHTVLPEGDESPEKIKYQAASPDEAALVTAAKNFGFFFYRRTPTAIYVRESHVEKIGKTQDEVYEILNVLEFNSVRKRQTVVCRYHDGRLVLYCKGADTVIYERLAGGQNDMKKVTKEYLEQFGSAGLRTLCLAYKDLSPAVYESWNEKFVQAKSSLRDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPDCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKRELQKYLDEQQLLLNTLSGPKLALLYAAEFPRFRRLRLTTLVKKGANKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRFLADLLLVHGRWSYIRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVVVVGLFDKENIYFVIFVLMSTFYFYFTLLLVPIFALFGDFIYLGVQRWFFPYDYQIIQEMHRNDADNYGRAQLLEIENRLTPAEARSFAIAQLPREGSKHTGFAFDSPGYESFFAAQLGIHAPQKAWDVARRASMRSKQKKAPK* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01200 931 Coils Coil 624 644 - -
Pte13g01200 931 Gene3D - 547 729 IPR023214 -
Pte13g01200 931 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 798 883 - -
Pte13g01200 931 FunFam Phospholipid-transporting ATPase IC 275 287 - -
Pte13g01200 931 NCBIfam HAD-IC family P-type ATPase 673 760 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g01200 931 ProSitePatterns E1-E2 ATPases phosphorylation site. 280 286 IPR018303 -
Pte13g01200 931 PRINTS P-type cation-transporting ATPase superfamily signature 681 700 - -
Pte13g01200 931 PRINTS P-type cation-transporting ATPase superfamily signature 566 576 - -
Pte13g01200 931 PRINTS P-type cation-transporting ATPase superfamily signature 278 292 - -
Pte13g01200 931 Gene3D - 289 546 IPR023299 GO:0000166
Pte13g01200 931 Pfam Phospholipid-translocating P-type ATPase C-terminal 709 796 IPR032630 -
Pte13g01200 931 SUPERFAMILY HAD-like 266 723 IPR036412 -
Pte13g01200 931 SUPERFAMILY Calcium ATPase, transmembrane domain M 68 827 IPR023298 -
Pte13g01200 931 SUPERFAMILY Calcium ATPase, transduction domain A 21 141 IPR008250 -
Pte13g01200 931 Gene3D - 20 145 - -
Pte13g01200 931 Pfam Cation transport ATPase (P-type) 375 469 - -
Pte13g01200 931 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 284 556 IPR023299 GO:0000166
Pte13g01200 931 FunFam Phospholipid-transporting ATPase 386 541 - -
Pte13g01200 931 NCBIfam phospholipid-translocating P-type ATPase 21 639 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01200 Pte-Chr13 13889195 13901105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01200 796 932 Primary Pumps ATPases AT1G59820 76.642 2.45e-62 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01200 K14802 - csv:101207069 1302.35