LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g01197	ATGAATAACCCATCTGTGCTTAATGCTGATAGTAATGCTGGTGATACTGAATCTGTCATTGGTAACCTTTGTGACCTGAGTATCAGTAACCATGTTAAAATCAGTTTATGTAGCAGCACTGTTTCTGGGTCTGAAAACAGTGTTAGTAGTAGCCAGGTTAGTAGCAGTACAGTTGAACCTCAAAAGAACACTGCTGAATCTTTGGTGGACTGTGAAGAAAGTGAGGAGAGCAGTCTGAGTTGTGTGAGCAATTCTAATAGTAATGATGGAATTGAGGCCAGTTTTAGGAGCATTTGCCCATCTAAACCACATAAGGGAAATGACAATAGATGGGATGCAATACAGTGTACGAAGGTTAAAGATGGGAATTTGGGGTTGGGACATTTCAGGCTTTTGAAGAAGCTTGGTTGTGGGGACATAGGGAGTGTGTATTTGGCTGAGTTGAGAGGTATGGGGTGCCTTTTTGCAATGAAGGTCATGGACAAGGGCATGCTGGCTGGGAGAAAAAAAGTGGCACGAGCTCAAACCGAGAGAGACATTTTGGCTTTGTTGGATCATCCATTTCTTCCAACCCTTTACTCACATTTTGAGACGGAGAAATTTTCTTGTTTGCTTATGGAATTTTGTAGTGGCGGGGATCTTCATACACTCAGGCAACGTCAACCAGGCAAGCACTTCACAGAGCAAGCAGCCAGGTTTTATGCAGCTGAGGTGCTGCTTGCACTTGAATATTTGCACATGATGGGAGTAGTGTACAGGGACTTGAAGCCGGAAAATGTCCTAGTGAGGGAGGATGGCCACATCATGCTCTCTGATTTTGATTTGTCATTGAAGTGCAACGTGAACCCTACTCTCATTCAGACAACCATGGAACCATCTTGTCAGATGTCTTCTTATTGTATTCAACCGTCTTGCATTCATTCAGCCTGCAAAATACCAGTATGCGTAGAGCCTTCTTGTTTACAACCCTCATGCTTCAAGCCAAAATTCTCAAGCTCCAGAAAACCCAAAACAAAGACTGAGAAAATGAATTCAGTAAATTCAGACTCACTCCCGGTACTTATTGCTGAGCCAACCCATGCTCGATCTATGTCATTTGTCGGTACACATGAATATTTAGCACCAGAGATCATACGAGGGGATGGTCATGGAAGTGCTGTGGATTGGTGGACATATGGGATATTCTTGTATGAGTTACTCCATGGGAGGACACCATTCAAAGGTACCGGAAACCGGGAGACGTTGTTCAATGTTGTCGGTCAGCCTCTGAGGTTTCCTGAGGGATGTAGTATTAGTTTTGCTGCAAAAGACTTGATTCGTGGTTTGCTAGTGAAAGATCCAAAGAAGAGGTTTGGTTTTAAGAGAGGAGCTACGGAGATAAAGCAACATCCTTTCTTTGAAACTATGAATTGGGCTCTCATTCGCAGTACTCACCCCCCAGAAATTCCAAAGCCGATTGACCTTTCATTTCTAAGCCATAAATTGAAGTCGTCGGTGCCTGCAAATGACAAATGCACTTTTGATTCAGATAGGTCATCATCTGGTCCTTACTTGGACTTTGAATTTTTTTGA	1572	0.4313	MNNPSVLNADSNAGDTESVIGNLCDLSISNHVKISLCSSTVSGSENSVSSSQVSSSTVEPQKNTAESLVDCEESEESSLSCVSNSNSNDGIEASFRSICPSKPHKGNDNRWDAIQCTKVKDGNLGLGHFRLLKKLGCGDIGSVYLAELRGMGCLFAMKVMDKGMLAGRKKVARAQTERDILALLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHTLRQRQPGKHFTEQAARFYAAEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLKCNVNPTLIQTTMEPSCQMSSYCIQPSCIHSACKIPVCVEPSCLQPSCFKPKFSSSRKPKTKTEKMNSVNSDSLPVLIAEPTHARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTYGIFLYELLHGRTPFKGTGNRETLFNVVGQPLRFPEGCSISFAAKDLIRGLLVKDPKKRFGFKRGATEIKQHPFFETMNWALIRSTHPPEIPKPIDLSFLSHKLKSSVPANDKCTFDSDRSSSGPYLDFEFF*	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g01197	523	FunFam	Serine/threonine-protein kinase D6PK-like	127	212	-	-
	Pte13g01197	523	MobiDBLite	consensus disorder prediction	41	64	-	-
	Pte13g01197	523	MobiDBLite	consensus disorder prediction	41	69	-	-
	Pte13g01197	523	FunFam	serine/threonine-protein kinase D6PK-like	361	484	-	-
	Pte13g01197	523	FunFam	serine/threonine-protein kinase D6PK-like	213	280	-	-
	Pte13g01197	523	Gene3D	Transferase(Phosphotransferase) domain 1	213	288	-	-
	Pte13g01197	523	PANTHER	FLIPPASE KINASE 1-RELATED	47	488	-	-
	Pte13g01197	523	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	250	262	IPR008271	GO:0004672\|GO:0006468
	Pte13g01197	523	Gene3D	Phosphorylase Kinase; domain 1	127	212	-	-
	Pte13g01197	523	SUPERFAMILY	Protein kinase-like (PK-like)	106	496	IPR011009	-
	Pte13g01197	523	Pfam	Protein kinase domain	130	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g01197	523	Pfam	Protein kinase domain	363	466	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g01197	523	ProSiteProfiles	Protein kinase domain profile.	129	466	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g01197	523	SMART	serkin_6	129	466	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g01197	523	Gene3D	Transferase(Phosphotransferase) domain 1	361	484	-	-
	Pte13g01197	523	CDD	STKc_phototropin_like	128	487	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte13g01197	Pte-Chr13	13548011	13550629	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte13g01197	22	524	AGC Kinase Gene Family	AT5G40030	72.475	0.0	711

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Pte13g01197		Pkinase	3.6e-37	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g01197	K08286		-	qsa:O6P43_009038	837.795