Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g01194 | ATGGCCTTGTCAGCAAGGATTAGCATAGTTTTTCTTGTGTCATTTGCCATTACAATCCCATGCCTACATGCTGGCATTGCTGAATATGACGATTACTTGAAGAAAGAAGCAGCCAATGCCCAAGAAGCTTCCCTTGAAGCCTATGATCCCCACCCAGAAAATATCACTGATGAATTCAACGCACAGGTTCGAAGGATCACCTTGTCTGAAGAGGGCAACAGCACAAGGAGAAACTTGGGTTCTAAGAAATACAAAGGACCATGCAAGGCAACCAACCCAATTGACATTTGCTGGCGATGCAAGGGAGATTGGTCTAAAGACCGAAAGAAATTAGCAAAATGTGTTATGGGGTTTGGGCATAAGACCACTGGCGGACTCAAAGGGAGGTACTATGTGGTCACTGAATCTTCAGACAAAAATGTTGTGAACCCGAGACCAGGAACTCTTCGCCATGCCGTGCAGCAGAAGGAACCTTTGTGGATCATCTTTGCTAGAAGCATGATGATTAAACTGACAAAAGAGCTGTTGGTGAGTAGTGATAAGACTATTGATGGTCGCGGGGCCAATGTGCAGATTGCTCATGGTGCTGGTATTAGTGTTCAGTTTGCTAAGAATGTTATTATTCATAATCTTCGTATCCATGACACTGTTAGAACGGAAGGTGGTCTTATTAGGGACTCAGCGAGTCATGTTGGTATAAGGACGACCGCTGACGGAGATGGTATTAGCATCTTTGCTTCTTCAAACATTTGGATCGATCATATTTCAATGTCTAATTGCGCTGATGGCCTCATCGATGTGGTACAAGGTTCTACAGGAGTCACCATATCAAATTGTCACTTCACCAAACACAACGATGTGATGCTTTTTGGTGCCAGTGACACTAACAGTATGGATAAAATAATGCAAATCACCGTAGCATTCAACCATTTTGGCAAAGGCTTAATACAAAGGATGCCTAGATGCAGGTGGGGATTCTTCCATGTTGTAAACAATGACTACACACATTGGCTTATGTACGCCATTGGTGGTAGCTCTGGCCCAACCATTATCAGCCAAGGCAACCGTTTCATTGCTCCTCCTAATCCTGCAGCAAATGAGATAACACATAGACACTATGCTCCACCAGCAGTGTGGAAGAAGTGGCAATGGATATCACAGAAGGATCTATTGATGAATGGTGCAAAGTTCATCCAATCTGGACCTCCTCTGAAAAAGAATGCTTTCGCCAATAATAAACAAATGATCACCCCCCAGGATGGAACAGCCGTGACATGGCTTACAAGGTTTTCAGGAGCAATCAAGTGTGTCCCAGGGAAACCTTGCTAG | 1329 | 0.4409 | MALSARISIVFLVSFAITIPCLHAGIAEYDDYLKKEAANAQEASLEAYDPHPENITDEFNAQVRRITLSEEGNSTRRNLGSKKYKGPCKATNPIDICWRCKGDWSKDRKKLAKCVMGFGHKTTGGLKGRYYVVTESSDKNVVNPRPGTLRHAVQQKEPLWIIFARSMMIKLTKELLVSSDKTIDGRGANVQIAHGAGISVQFAKNVIIHNLRIHDTVRTEGGLIRDSASHVGIRTTADGDGISIFASSNIWIDHISMSNCADGLIDVVQGSTGVTISNCHFTKHNDVMLFGASDTNSMDKIMQITVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSSGPTIISQGNRFIAPPNPAANEITHRHYAPPAVWKKWQWISQKDLLMNGAKFIQSGPPLKKNAFANNKQMITPQDGTAVTWLTRFSGAIKCVPGKPC* | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g01194 | 442 | PANTHER | PECTATE LYASE 18-RELATED | 40 | 440 | IPR045032 | GO:0030570 | |
Pte13g01194 | 442 | Pfam | Pectate lyase | 175 | 357 | IPR002022 | - | |
Pte13g01194 | 442 | SUPERFAMILY | Pectin lyase-like | 77 | 436 | IPR011050 | - | |
Pte13g01194 | 442 | SMART | amb_all | 166 | 363 | IPR002022 | - | |
Pte13g01194 | 442 | Pfam | Pectate lyase, N terminus | 26 | 79 | IPR007524 | GO:0030570 | |
Pte13g01194 | 442 | Gene3D | - | 91 | 435 | IPR012334 | - | |
Pte13g01194 | 442 | PRINTS | Pollen allergen Amb family signature | 238 | 259 | IPR018082 | - | |
Pte13g01194 | 442 | PRINTS | Pollen allergen Amb family signature | 340 | 359 | IPR018082 | - | |
Pte13g01194 | 442 | PRINTS | Pollen allergen Amb family signature | 318 | 337 | IPR018082 | - | |
Pte13g01194 | 442 | PRINTS | Pollen allergen Amb family signature | 114 | 131 | IPR018082 | - | |
Pte13g01194 | 442 | PRINTS | Pollen allergen Amb family signature | 138 | 163 | IPR018082 | - | |
Pte13g01194 | 442 | PRINTS | Pollen allergen Amb family signature | 174 | 190 | IPR018082 | - | |
Pte13g01194 | 442 | PRINTS | Pollen allergen Amb family signature | 413 | 436 | IPR018082 | - | |
Pte13g01194 | 442 | PRINTS | Pollen allergen Amb family signature | 382 | 406 | IPR018082 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g01194 | Pte-Chr13 | 13235045 | 13236937 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g01194 | 1 | 443 | Polysaccharide Lyase | AT5G15110 | 55.907 | 0.0 | 540 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g01194 | K01728 | - | qsa:O6P43_004519 | 635.95 |