Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g01192 | ATGCGGGGTACAGAAATGGGTTGCTCTCCATTTTGTTCTTCAGTGATCAGATGGTACTCTTTTCATTGTTTCACGTCGTACACACTGGGAATACTCAAGCTGGTGCTTTTGTGTTGTACTATGTCATGTTGGAATGTGTCGTCAGCTGATTCTGACAAATCGGCGTTGCTTCAGTTTAAGAACTCAGTCTCAGACCCTGAGGGGCTACTCTCAAGTTGGAACCCTGTTGATTCCAGTCACTGTTCTTGGTTCGGTGTCTATTGTGGTTCGGGTGATCGGGTTGTTTCGCTTAACATTACTGGAAATGGAAGGGAAGGTACGTCGAATGCTTTTTCTTGTTATGATTATGCTCAATTCCCTCTTTACGGGCTTGGAATTAGAAGAAGCTGTGAGGGTGCTAAGGGTTATTTGGCAGGGCAATTGCCTAGTGTGATCAGTGAGCTAAGTGAGCTTAAAATTTTATCACTTCCTTTTAACGGTTTTGATGGTGAAATTCCTAGTGAAATATGGGGTATGGACAAGTTGGAAGTTCTCGATCTAGAAGGTAATATGATTGCTGGAACCCTCCCTTTTCAGTTTCGTGGATTGAAGAACTTACGAGTTATTAATCTTGGGTTTAACAGACTTGCAGGAGAGTTACCAAGCTCATTATCGAGTTTTCAGAACTTAGAAATATTGAATTTGGCTGGGAACGGTTTGAATGGTTCTGTTCTCGGGTTTGTCGGTAAACTAAGACAAGTGTATTTATTGTTTAACTTGTTCAGTGGGGAAATTCCAAGTGACATAGGGGAGGATTGTGCTAAGCTTGAGCACCTAGATTTGTCAGGTAATTTCCTAGTCCGTGGAATTCCGAGCAGTCTGGGGAATTGTAGGCAGTTGAGAACACTTCTTTTGTATGAGAATATGTTGGAAGAGGCTATTCCTGCTGAGCTTGGCCTTCTTCAGAATCTTCAAGTTTTGGATGTTTCAAGGAATAGTCTCAGTGGTTCGATCCCAAAAGAGCTTGGAAATTGTTCTGAATTATCTGTTCTGGTGCTGTCAAATTTATTCCATCCTCTTCCAGTGGTCAATAATACAATGAGGAACCCTTATCAGGAGCAATTGGATCTATTGGATGACGAACTGAATTACTATGAAGGTGGAATCCCAGAAGAAATTACTATGCTTCCAAAACTTAGAATATTATGGGCACCAAGGGCAACTCTCGAGGGCAGTTTCCTCAGCAATTGGAGTGCTTGTGACAGCCTAGAGATGATCAATTTGTCTCAGAATTTTTTCAAAGGGAAATTCCCTAATGAGATGAATCAGTGTAAGAAATTGCAGTTTGTTGATTTGAGCTCCAATCACTTGACTGGGGAGCTCCATGAGGGGCTCGTAGTGCCCTGTATGATTGTGTTTGATGTCAGTGGGAACTCCTTTTCTGGTTCAATTCCTAAGTTCTCCAACTACTCTTGTTCTCCTGTTCTGTCTTCAAGAACTCATATCTTTGAAACCGAGAACCCTTCTGCTGTATACAGATCATTCTTTCTGTCCACATTTCAGCTTGGAACGCCTTTTCCTATGATTGGAAACGTTAGTGGTCTTTCTGTTTTTCACAACTTCGGTCGCAATAACCTAACAGGCATCATCCAGTCAATTCCGATTGCACCTGAGAGATTAGGAAAGCAAACTGTCTATGCATTTCTTGTTGGGGAAAACCAGCTTACAGGATCATTTCCTGGTATGTTATTTGATAAGTGTGATGGATTGGATGGACTCATTGTCAATGTCAGTCGTAACAGGTTATCTTGTGAGATACCAGTTAGACTTGATTCCATGTGCAGATCCCTAAAGTACTTGGATTTATCTGGGAATCAAATTTATGGATCAATTCCTACAGATCTGAGAGCATTAGTGTCCCTTGTTGGTCTGAATTTAAGTTGGAATCAATTGCAAGGTCCAATTCCAACAAGTCTTGGCCTTATTAAGGATTTAAAGTTTCTTTCTTTGGCTGGTAACAATTTGACTGGTGTTATTCCAACTAATTTGGGTCAGTTATATTCATTAGAAGTTATTGACCTTTCTTCAAACTCTCTTTCTGGTGAGATTCCTAAGGTCCTTATAAACCTGAGAAGTCTGAGAACACTTCTGCTCAGTAACAACAAACTCACTGGGGAAATTCCTGCAGCTTTGGCAAAAGTGACCTCTCTTTCATCATTCAATGTGTCTTTCAATAACTTGTCTGGATCACTTCCGTTGAATAGTAACTTGATGAAATGCAACAGTGCTATTGGAAACCCACGAATTCAGTCGTGCCGTATGTTTTCTCTGACAGTGCCATCCTCAGATCCACAAGGGAGTACTGGGGAACTGAACTCCTATACTGCTGCACCTCCAGAGGAAGGTAGCAATCAGCACAGAAACGGTTTCAATTCAATTGAGATTGCATCTATAACTTCTGCATCAGCCATAGTTTCTGTTCTTTTGGCCTTGATTGTTCTGTTCTTCTATACAAGGAAGTGGAGTTCCAAATCTCGGGTTGGGGGATCTATGAGAAAAGAAGTAACTGTTTTTACTGAGATTGGTATTCAATTAAACTATGAGAATGTAGTGCGTGCCACTGGGAGTTTCAATACAAGTAACTGCATCGGTAGCGGAGGATTTGGGGCAACTTATAAGGCAGAGATAGCACCAGGAATCTTGGTGGCAATCAAACGGCTTGCAGTTGGACGGTTCCAAGGGGTTCAACAATTCCACGCAGAAATCAAAACCCTAGGAAGACTTCGTCATCCAAACTTAGTGACTTTAATCGGTTATCATGCTAGTGAAACGGAAATGTTCCTCATATACAACTACCTGCCAGGTGGAAATCTTGAGAAGTTCATACATGAAAGATCAAAGAGGGCTGTGGATTGGAGGATTCTTCACAAGATTGCGCTAGATATAGCCCGTGCTCTTGCCTATCTTCATGATCAGTGTGTGCCGCGCGTTCTGCACCGTGATGTGAAGCCAAGCAATATCTTACTGGATGACGATTTCAATGCTTATCTGTCTGACTTTGGGTTAGCCAGGCTTTTAGGAACGTCAGAAACACATGCTACCACTGGGGTTGCTGGAACTTTTGGGTATGTTGCTCCTGAATATGCAATGACTTGCCGTGTTTCTGATAAAGCTGATGTGTATAGTTATGGCGTGGTACTCTTAGAGCTACTGTCAGACAAGAAAGCATTGGATCCTTCATTTTCTTCGTTTGGAAATGGTTTCAACATTGTTGCATGGGCATGTTTGCTCCTGCGTCAGGGTCGTGCCAAAGAGTTTTTCGCAGCAGGACTGTGGGATGCAGGACCCCATGATGATTTGGTAGAAGTGTTGCACCTAGCTGTTGTGTGCACAGTAGACTCTCTCTCAACGAGACCTACCATGAAACAGGTTGTACGACGGCTGAAACAGCTTCAACCTCCTTCATGCTAA | 3450 | 0.4226 | MRGTEMGCSPFCSSVIRWYSFHCFTSYTLGILKLVLLCCTMSCWNVSSADSDKSALLQFKNSVSDPEGLLSSWNPVDSSHCSWFGVYCGSGDRVVSLNITGNGREGTSNAFSCYDYAQFPLYGLGIRRSCEGAKGYLAGQLPSVISELSELKILSLPFNGFDGEIPSEIWGMDKLEVLDLEGNMIAGTLPFQFRGLKNLRVINLGFNRLAGELPSSLSSFQNLEILNLAGNGLNGSVLGFVGKLRQVYLLFNLFSGEIPSDIGEDCAKLEHLDLSGNFLVRGIPSSLGNCRQLRTLLLYENMLEEAIPAELGLLQNLQVLDVSRNSLSGSIPKELGNCSELSVLVLSNLFHPLPVVNNTMRNPYQEQLDLLDDELNYYEGGIPEEITMLPKLRILWAPRATLEGSFLSNWSACDSLEMINLSQNFFKGKFPNEMNQCKKLQFVDLSSNHLTGELHEGLVVPCMIVFDVSGNSFSGSIPKFSNYSCSPVLSSRTHIFETENPSAVYRSFFLSTFQLGTPFPMIGNVSGLSVFHNFGRNNLTGIIQSIPIAPERLGKQTVYAFLVGENQLTGSFPGMLFDKCDGLDGLIVNVSRNRLSCEIPVRLDSMCRSLKYLDLSGNQIYGSIPTDLRALVSLVGLNLSWNQLQGPIPTSLGLIKDLKFLSLAGNNLTGVIPTNLGQLYSLEVIDLSSNSLSGEIPKVLINLRSLRTLLLSNNKLTGEIPAALAKVTSLSSFNVSFNNLSGSLPLNSNLMKCNSAIGNPRIQSCRMFSLTVPSSDPQGSTGELNSYTAAPPEEGSNQHRNGFNSIEIASITSASAIVSVLLALIVLFFYTRKWSSKSRVGGSMRKEVTVFTEIGIQLNYENVVRATGSFNTSNCIGSGGFGATYKAEIAPGILVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIHERSKRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSFGNGFNIVAWACLLLRQGRAKEFFAAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPSC* | 1150 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g01192 | 1149 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 990 | 1002 | IPR008271 | GO:0004672|GO:0006468 | |
Pte13g01192 | 1149 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 527 | 770 | - | - | |
Pte13g01192 | 1149 | SMART | LRR_typ_2 | 266 | 290 | IPR003591 | - | |
Pte13g01192 | 1149 | SMART | LRR_typ_2 | 703 | 726 | IPR003591 | - | |
Pte13g01192 | 1149 | SMART | LRR_typ_2 | 172 | 195 | IPR003591 | - | |
Pte13g01192 | 1149 | SMART | LRR_typ_2 | 679 | 702 | IPR003591 | - | |
Pte13g01192 | 1149 | SMART | LRR_typ_2 | 196 | 220 | IPR003591 | - | |
Pte13g01192 | 1149 | SMART | LRR_typ_2 | 314 | 338 | IPR003591 | - | |
Pte13g01192 | 1149 | SMART | LRR_typ_2 | 607 | 631 | IPR003591 | - | |
Pte13g01192 | 1149 | SUPERFAMILY | L domain-like | 51 | 351 | - | - | |
Pte13g01192 | 1149 | ProSiteProfiles | Protein kinase domain profile. | 870 | 1144 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte13g01192 | 1149 | SMART | serkin_6 | 870 | 1148 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte13g01192 | 1149 | Pfam | Protein kinase domain | 872 | 1071 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte13g01192 | 1149 | Pfam | Leucine Rich Repeat | 316 | 338 | IPR001611 | GO:0005515 | |
Pte13g01192 | 1149 | Pfam | Leucine Rich Repeat | 268 | 290 | IPR001611 | GO:0005515 | |
Pte13g01192 | 1149 | Gene3D | Ribonuclease Inhibitor | 239 | 461 | IPR032675 | - | |
Pte13g01192 | 1149 | Gene3D | Ribonuclease Inhibitor | 462 | 770 | IPR032675 | - | |
Pte13g01192 | 1149 | Pfam | Leucine Rich repeat | 607 | 620 | IPR001611 | GO:0005515 | |
Pte13g01192 | 1149 | ProSiteProfiles | Leucine-rich repeat profile. | 609 | 632 | IPR001611 | GO:0005515 | |
Pte13g01192 | 1149 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 312 | 1143 | - | - | |
Pte13g01192 | 1149 | Pfam | Leucine rich repeat N-terminal domain | 49 | 88 | IPR013210 | - | |
Pte13g01192 | 1149 | Gene3D | Transferase(Phosphotransferase) domain 1 | 946 | 1146 | - | - | |
Pte13g01192 | 1149 | Gene3D | Ribonuclease Inhibitor | 48 | 238 | IPR032675 | - | |
Pte13g01192 | 1149 | CDD | STKc_IRAK | 876 | 1144 | - | - | |
Pte13g01192 | 1149 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 263 | 354 | - | - | |
Pte13g01192 | 1149 | Gene3D | Phosphorylase Kinase; domain 1 | 831 | 945 | - | - | |
Pte13g01192 | 1149 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 946 | 1148 | - | - | |
Pte13g01192 | 1149 | ProSitePatterns | Protein kinases ATP-binding region signature. | 876 | 898 | IPR017441 | GO:0005524 | |
Pte13g01192 | 1149 | Pfam | Leucine rich repeat | 658 | 716 | IPR001611 | GO:0005515 | |
Pte13g01192 | 1149 | SUPERFAMILY | Protein kinase-like (PK-like) | 856 | 1141 | IPR011009 | - | |
Pte13g01192 | 1149 | MobiDBLite | consensus disorder prediction | 773 | 798 | - | - | |
Pte13g01192 | 1149 | SUPERFAMILY | L domain-like | 376 | 746 | - | - | |
Pte13g01192 | 1149 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 834 | 945 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g01192 | Pte-Chr13 | 13062935 | 13066743 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g01192 | 49 | 1150 | Receptor kinase-like Gene Family | AT3G02130 | 65.650 | 0.0 | 1392 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XV | Pte13g01192 | Pkinase | 2.8e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g01192 | - | - | qsa:O6P43_009155 | 1622.83 |