Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01173 ATGGCAAACCCCTCCTCTATCTTTCGTTCCAAGAAATTCTCTGTTTTTGTCAATATATCTTTCCTCTTTCTTCTTTCTCTTTTCATCTCCAACTCAACAGATTATCTTAGTGATCAGCTCAACTTCAATGGTCCCCTCAGTACAACTATCTTCAACCATCCTCGGGCGCTTATAGATATTACTGCAGATGACTGCGCTGGCCTGCACAAGCACGGTGACCAGGAGTCAAAGTGCTTGTACATAAAAACACATCCCAGCTGCAAGGCCAAAGGGTACATAAACTATGTCCAATTTTTTTACTGCAATGTCGGCCAATCACCTCTTCTTGGTTATATACTTTATCTTTTATGGCTCCTTATATTGTTCTATCTTCTGGGAAACACTGCCTCGACGTACTTTTGTTCCTCTCTAGAAAACTTGTCCAAAGTATTGAAGCTTTCTCCAGCCATAGCTGGAATTACACTTTCACTAGGAAATGGGGCTCCTGATGTTTTTGCTAGTGTTATTTCATTCACGAAATCAAACAACGGTGATGTTGGTCTCAACAGCATACTAGGTGGGGCATTTTTTATTTCAAGCACAGTCATAGGAATCATAAGCATACTAATTAGTCCAAATCACACTGCAGTGGACAAGATCAGCTTTGCAAGAGATGTCCTTTTCTTCCTTTTCTCACTTTTCATTCTTCTCATGATTATTATCATTGGGAAGATAAACCTTTGGTGTGCGATATGTTTTGTCTCCATCTACTTTGTTTATGTCTTTGTTGTTTCTGTCACACATTTCTTCCTTGGAATAAACAAGTTTGAAGAAGACCCATTTGCTTCTCTATCTCCATCTTCAAAGATTTTCTCTCTTAACCAAAGTGACTTAGAAGATGCTGGCATAGGTATACCTTTGTTGGGTTATGCTGATGATCATGAAAAACCAGTTTCAGAAGAGAAGGCATGCCTTCAAGACGAACTGCAAAATTTAACACCATTCAATTATGATCTATCGAATTCTTCTTCCTTGCACAAGTTTCTGTTTATTTTGGAATTACCGTTGTACTTGCCAAGAAGACTTACCATACCAGTTGTCAGTGAGGACAGATGGTCGAAACCATACGCTGTTATTTCTGTCACATTAGCACCAGTTTTGTTGGCAGCTCTACTAAACACACAAATGGAAAACGTGGATTCACAAACATGTCTAGTTACCTACATGACAGCAAGTTTGATTGGGATATTTTTTGGAAATATGGCATATGTTTCAACAAACAAGAATAGTCCTCCACTAAAATGTTTGATACCTTGGCTGGCTGGAGGGTTTATCATGAGTGTGACATGGACCTATATCATTGCTGAGGAGCTAGTTTCTCTGTTAATTTCACTAGGGTATATTGTTGGGGTGAAACCATCCATCCTTGGACTGACTGTCCTAGCTTGGGGTAACTCACTTGGGGACTTGATATCCAATGCAACTATGGCAATGAATGGTGGGACAGATGGGGTTCAAATTGCAATAGCTGGTTGCTATGCAGGGCCAATGTTCAATACCTTGGTGGGTTTAGGCTTGCCTCTGGTTCTGTCATCCTGGTCTGAGTATCCGGATTCATTTGTAATTCCAAGAGACCCTTCATTATATGAAACTCTGGCATTCTTGATGGGAGGTTTGCTTTGGGCCCTTGTGATATTGCCAAAGAAAAACATGAAGTTGGATAAGTCTCTTGGAGTTGGTCTCCTGGCAATTTACATGTGCTTCTTGTTTCTGAAAGTAACCACAATTGTAGGTCTTGTGAAAACATAA 1788 0.4004 MANPSSIFRSKKFSVFVNISFLFLLSLFISNSTDYLSDQLNFNGPLSTTIFNHPRALIDITADDCAGLHKHGDQESKCLYIKTHPSCKAKGYINYVQFFYCNVGQSPLLGYILYLLWLLILFYLLGNTASTYFCSSLENLSKVLKLSPAIAGITLSLGNGAPDVFASVISFTKSNNGDVGLNSILGGAFFISSTVIGIISILISPNHTAVDKISFARDVLFFLFSLFILLMIIIIGKINLWCAICFVSIYFVYVFVVSVTHFFLGINKFEEDPFASLSPSSKIFSLNQSDLEDAGIGIPLLGYADDHEKPVSEEKACLQDELQNLTPFNYDLSNSSSLHKFLFILELPLYLPRRLTIPVVSEDRWSKPYAVISVTLAPVLLAALLNTQMENVDSQTCLVTYMTASLIGIFFGNMAYVSTNKNSPPLKCLIPWLAGGFIMSVTWTYIIAEELVSLLISLGYIVGVKPSILGLTVLAWGNSLGDLISNATMAMNGGTDGVQIAIAGCYAGPMFNTLVGLGLPLVLSSWSEYPDSFVIPRDPSLYETLAFLMGGLLWALVILPKKNMKLDKSLGVGLLAIYMCFLFLKVTTIVGLVKT* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01173 595 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 16 593 - -
Pte13g01173 595 Gene3D - 336 587 IPR044880 -
Pte13g01173 595 Gene3D - 146 278 IPR044880 -
Pte13g01173 595 Pfam Sodium/calcium exchanger protein 433 586 IPR004837 GO:0016020|GO:0055085
Pte13g01173 595 Pfam Sodium/calcium exchanger protein 115 257 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01173 Pte-Chr13 12707222 12709283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01173 62 595 Antiporters AT5G17860 51.017 3.50e-177 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01173 K13754 - jre:109000857 660.603