Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01162 ATGGAGGCGCTCCATATTTTGCTTGGATGCATTGCCTTCTTCATCCTCATCCTCCGCCCTCTCCTAAATCGTTCTCGAGTCAAGAACAGCCCACCTGGCCCAACTGGCCTCCCCATCGTTGGTAACCTTCTACAACTTGGTGCCAGACCCCACGAGACCCTTGCTAACTGGGCCAAAACCTACGGCTCCCTCATGTCAATCCGGCTCTGCTCTGCCACCGTTATCGTGGCCTCCTCTCCCACCTTAGCCCAAGAAATCCTCCATAAAAACGACCAAACCTTCTCCAACCGTCCTGTTCCAGACTGTATACAATCTCAGCCAAATGTCGAAGGAACCCTTGCTTGGGTCCCCGGTGACAGCCACTGGCGCAACCGCAGACGCGTCTGCAGCACGCAGATGTTTACACCCCAACGTCTTGACTTCCTTCAACACTTTAGACACCGTAAAGTCGACCAACTCATAGAGCACATCAGAAAACACTGTGTGTCTGGCACACCTGTGGACATCGGAGAGCTTTCATTTGCTAGTACTTTGAACTTGATATCCAACACCATCTTCTCCACTGATGTCGTTGACCCTAATTTCGAGTCTGCTGGAGAGTTCAAGGAGCTTGTGTGGAGGATCATGGAGTCCGCAGGGAAGCCTAACGTCTCAGACTATTTTCCAGTGTTGAAGAGGTTTGATTTGCAAGGAATGAGGAAGCATGTGCAGGTATCTTATGTGAGAATGCATGAGATATTTGACGAGATCATCGGCAAACGTTTGGAAGCTAGAGCAACTTCCAATGTTAGAAATGAAGATTTTTTGGACGTATTGCTTGACCAGTGCAAAGAGGATAGCTCCCTTTTCAGTATTGCAACCATCAAACCATTAATTCTGGATTTATTTATAGCCGGAAGTGACACATCAGGGATAACAACAGAATGGGCAATGGCAGAACTTCTTAGAAAACCCGAGACACTCCAAAAGGCAAGAAAGGAAGTGTTAGAGGCAATCGGTGCCAACGGAGAAGTGAAAGAATCAGACCTCGAACGACTTCCTTACATCCAAGCTGTTGTGAAAGAGACTCTTCGTCTTCATCCACCTGCACCCCTTCTACTGCCTTACATCGCTTCCAACGACGTGGAGATTGGTGGTTACACTATTCAAAAAGGAAATCACGTTATGGTAAATGCCTGGTCCATTGGAAGAGATCAGGCATACTGGGATGAACCATTGTCATTTTTACCTGAAAGGTTTATGGGGTCTGCCATAGACTACAAAGGTCGAAACTTCGAGTACATACCATTCGGAGCTGGCAGAAGGATTTGCCCAGGTTTGCCACTTGCTAATAGAATGGTATACCTGATGTTGGCTGCTATGCTACACTCGTTTGATTGGAAACTCCCTAAAGGTCAGACTCCAGCTGATTTGGACATGACTGAGCAATTTGGAATCACACTTAAGAAAGCAGTCCCTCTTTGTGCTGTTCCAATCTCATAA 1482 0.4717 MEALHILLGCIAFFILILRPLLNRSRVKNSPPGPTGLPIVGNLLQLGARPHETLANWAKTYGSLMSIRLCSATVIVASSPTLAQEILHKNDQTFSNRPVPDCIQSQPNVEGTLAWVPGDSHWRNRRRVCSTQMFTPQRLDFLQHFRHRKVDQLIEHIRKHCVSGTPVDIGELSFASTLNLISNTIFSTDVVDPNFESAGEFKELVWRIMESAGKPNVSDYFPVLKRFDLQGMRKHVQVSYVRMHEIFDEIIGKRLEARATSNVRNEDFLDVLLDQCKEDSSLFSIATIKPLILDLFIAGSDTSGITTEWAMAELLRKPETLQKARKEVLEAIGANGEVKESDLERLPYIQAVVKETLRLHPPAPLLLPYIASNDVEIGGYTIQKGNHVMVNAWSIGRDQAYWDEPLSFLPERFMGSAIDYKGRNFEYIPFGAGRRICPGLPLANRMVYLMLAAMLHSFDWKLPKGQTPADLDMTEQFGITLKKAVPLCAVPIS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01162 493 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 492 - -
Pte13g01162 493 FunFam Cytochrome P450 76C4 22 490 - -
Pte13g01162 493 Pfam Cytochrome P450 31 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Pte13g01162 493 Gene3D Cytochrome P450 21 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01162 493 CDD CYP76-like 58 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01162 Pte-Chr13 12548272 12550944 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01162 2 492 Cytochrome P450 AT2G45550 44.088 1.27e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01162 - - qsa:O6P43_006332 811.986