Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01160 ATGCATTACTTTCTATATAAGGCCCAGCATGCTGCAATGAATGTCAGTCCAGAGGAGAGGACTACTCATTTGATTCATACGATGGAACTCCATATTTGGCTTGCTGCCATCGCCTTCTTCCTCCTCGTCGTACGACCTCTGCTTAATCGTTCTCGTGTCAAGAACCGGCCGCCCGGTCCAACCGGTCTCCCATTCATCGGTAACCTTTTCCAAGTTGGTCCCAAACCCCACGAAGCTTTTTGTAGCTTAGCCAAAACCTATGGCCCCATCATGTCCCTTCGAATGGGCTCTGTCAACGTTGTTGTTGCCTCCTCCCCCAACATAGCCCAAGAAATCTTTCAAAAGAATGGCCATAACTTCACCGATCGTCCTGTTCCTGACTCCATTGCTTGTCAAAAAAACATGGAGGGTAGCCTTGCTTGGGCTCCCATCGATCAACTCTGGCGAAACCGAAGACGGCTCTGCGGTACGAAGATGTTTTCAGGTCGACGTCTTGACTTACTTCAACATGCTAGGCATCGGGTAGTGCAGAAATGCATACAACGCATTAGAGAACACTGTGCGGCTGGCACACCAGTAAATATTGGACTGCTTGCCAGTGATACTACTCTGAACTTTATGACAAACACCATCTTCTCCGTTGATGTGGATGACCTTAACTTCGAGTCGACTGGAAAGTTCAAGGATCTCATAGTGATGAACTTGGAAGCAGGAGGGAAGCCCAACATCTCAGACTTCGTGCCAGCATTGAAGAGGTTTGATCTGCAAGGCAGTAGAAGGAAATTCCAGTTGTCTATTGATAGACTAGGGCATGTATTTGACGAGCTTATCAGTAAGCGGTCCAAGTCTCGAGCAGCTTCCACGGATAGAAATGGTGATTTCTTGGATGTAATGCTTGACCTGTGCGAAGAGGAAAGCTCGTGTTTCAATCTTGATAACCTCAAACCCTTACTTGTGGACTTATTTGTTGCGGGAAGTGACACATCTTGGATATCAGTAGAGTGGGCAGTGGCAGAACTTCTTAGAAACCCCGAAACACTGCAGAAGGCAAGAAAAGAAGTGTTAGAAGTGATTGGTGAAGGTGGAGAAGTGAAAGAATCAGACGTCGAAAAACTCCCATACATCCAAGCTACTGTGAAAGAGGCACTTCGTCTTCACCCTCCAACCCCACTTCTATTGCCTTACCTTGCTTCAAATGATGTGGCCATTGGTGGCTACACTGTTCAAAAAGGGGACCAGGTTTTGGTCAATGCATGGTCCATTGCTAGAGATTCGAAGTACTGGGACAAACCACTGTTATTCTCACCTGAAAGGTTTCTGGGGTCTGCTATAGACTACAAAGGTCGAAACTTTGAGTACATCCCATTTGGTGCAGGCAGGAGGGTGTGCCCAGGTTTGCCACTTGCTAATAGAATGTTGTATTTCATGCTGGCGTCGATGTTGTACTCGTTTGACTGGAAACTTCCGGATGGCGTTTCTCCTTGTGACATGGATATGAGAGAGGACTTTAGAATCACGCTGAGGAAGGCAGTTCCCCTTTGGGCTCTTCCAGTCGCATAA 1560 0.4712 MHYFLYKAQHAAMNVSPEERTTHLIHTMELHIWLAAIAFFLLVVRPLLNRSRVKNRPPGPTGLPFIGNLFQVGPKPHEAFCSLAKTYGPIMSLRMGSVNVVVASSPNIAQEIFQKNGHNFTDRPVPDSIACQKNMEGSLAWAPIDQLWRNRRRLCGTKMFSGRRLDLLQHARHRVVQKCIQRIREHCAAGTPVNIGLLASDTTLNFMTNTIFSVDVDDLNFESTGKFKDLIVMNLEAGGKPNISDFVPALKRFDLQGSRRKFQLSIDRLGHVFDELISKRSKSRAASTDRNGDFLDVMLDLCEEESSCFNLDNLKPLLVDLFVAGSDTSWISVEWAVAELLRNPETLQKARKEVLEVIGEGGEVKESDVEKLPYIQATVKEALRLHPPTPLLLPYLASNDVAIGGYTVQKGDQVLVNAWSIARDSKYWDKPLLFSPERFLGSAIDYKGRNFEYIPFGAGRRVCPGLPLANRMLYFMLASMLYSFDWKLPDGVSPCDMDMREDFRITLRKAVPLWALPVA* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01160 519 Gene3D Cytochrome P450 48 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 34 518 - -
Pte13g01160 519 FunFam Cytochrome P450 76C4 48 516 - -
Pte13g01160 519 SUPERFAMILY Cytochrome P450 57 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Pte13g01160 519 Pfam Cytochrome P450 57 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 CDD CYP76-like 84 517 - -
Pte13g01160 519 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g01160 519 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01160 Pte-Chr13 12502693 12505259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01160 30 518 Cytochrome P450 AT2G45550 42.510 1.79e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01160 - - qsa:O6P43_006332 639.032