Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01158 ATGGCGCAACAGACCTGTGGAGAAGTTTGCCAACGCAAAGCACTGAAAACCTCAGACTCTCTATCAACTTTCCTACAATTTGCGGAGTTGGTCCTTCCATGGCTTAAACCGGCGGAGCTCGCTAATACCTCTTTGACTTGCAAGGCCCTTTATCGGATTTCAAAATCCATCACTCTCGCCCGATCTTCAGACGCTACCAGAGGCTTCGAGAACGTTGTAATCCCTTTCTGCAACACTGTCGATGATCACCCATATGCTTACTTCATCTACACACCCTCGCTAATCCTACCCTCCTCTTCTTCAGAATTCCAACGCCAGTCGTGGGGTTCAGCTAATTTTGCTTCTTTACCTAGTCGTGTTGGTTCGGGTAGACCCAGTGTTGATTCTGTCCGTTTGGTGGACGAGACGGGCAAGAATGTATGTGGGTGTAACTGCCAGAGTTGTAGGGAGCTGGAAGACGAAGACGATATTGGGTGTCCTTGTTTGAGCTTGTTTAATGGGTCGGAATGTGATGTGGCCACTGAGTGTGGACCCGGTTGTGCTTGTGGGTTGGACTGTGGAAACCGCTTCAGTCAGAAAGGGATTACTGTTCATTTGAAGCTTGTGAAAGATAAGAGCAAAGGATGGTGTGTATATGCGGATCAATCTATCAAAAAAGGAGAGTTCATTTGTGAGTATGCAGGTGAGCTCCTGACAACAGTAGAAGCAAGAAGACGGCATAAGAAACATGATGAACTTGCATCGAAAGGCAGCTTTTCCTCTGCTCTTTTGGTTGTGAGGGAGCACCTGCCTTCGGGAAAAGCTTGCTTGAGGATGAATATAGATGCTACAAGCGTTGGAAACGTTGCAAGGTTCATTAATCATTCATGTGCTGGTGGTAACCTGTTCACAAATCTGGTGAGATGTTCAGGAGCATTGTTCCCTCGTCTTTGTTTCTTTGCTTCAAAAGACATAGATGAAGGTGAAGAACTTACGTTCAGCTATGGTGAAATTAGAAAAAAGCCAAACGGTTTGCAATGCCTTTGTGGTAGCTCCAATTGCTTTGGCATATTACCTTCAGAAGATACTTGA 1071 0.4575 MAQQTCGEVCQRKALKTSDSLSTFLQFAELVLPWLKPAELANTSLTCKALYRISKSITLARSSDATRGFENVVIPFCNTVDDHPYAYFIYTPSLILPSSSSEFQRQSWGSANFASLPSRVGSGRPSVDSVRLVDETGKNVCGCNCQSCRELEDEDDIGCPCLSLFNGSECDVATECGPGCACGLDCGNRFSQKGITVHLKLVKDKSKGWCVYADQSIKKGEFICEYAGELLTTVEARRRHKKHDELASKGSFSSALLVVREHLPSGKACLRMNIDATSVGNVARFINHSCAGGNLFTNLVRCSGALFPRLCFFASKDIDEGEELTFSYGEIRKKPNGLQCLCGSSNCFGILPSEDT* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01158 356 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 61 346 - -
Pte13g01158 356 Gene3D SET domain 44 338 IPR046341 -
Pte13g01158 356 ProSiteProfiles Post-SET domain profile. 336 352 IPR003616 -
Pte13g01158 356 Pfam SET domain 208 329 IPR001214 GO:0005515
Pte13g01158 356 SMART set_7 197 335 IPR001214 GO:0005515
Pte13g01158 356 SUPERFAMILY SET domain 71 349 IPR046341 -
Pte13g01158 356 ProSiteProfiles SET domain profile. 197 329 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01158 Pte-Chr13 12462496 12464159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01158 175 351 C2H2 Transcription Factor Family AT2G23740 36.216 1.50e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte13g01158 SET 2.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01158 K11433 - qsa:O6P43_009907 457.603