Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01111 ATGAAGTACATATGCACCAACAGCTTGAAGAGGCTATTCTCACTCAAAAGACGAAGTTTTAGTGAAGACCCGTTGAGCTCAACTGTCTCTACTGGCGATGAAAACGATGAAAGCTTAAATATTTTTCAATTGACAAAGTGTCCTCAAAGACCCACTTGGAAATGCTTCTCGTATGAAGAAATATTTGAAGCTACCAATGGATTTGACTCAGAGAATTTGGTCGGAAAAGGTGGCTATGCTGAGGTTTACAGGGGAACTCATGAAAATGGCGAAGCCATAGCTGTGAAAAGATTGACCAAAACTTCATCTGATGAGCGAAAAGGGAAAGAGTTTTTGACAGAGATTGGTACAATTGGTCATGTTCATCATCCTAATGTGTCTTCTCTGCTTGGCTGTTTCATTGACAATGGTCTTTACCTGGTCTTTCAATTCTCCTCCAAAGGCTCTGTGACATCTCTTCTTCATGGTAATGAAATGAATAGCTATTGGGACAGCACGTGGCTAACAAGACACAAGATAGCTATTGGGATAGCATGTGGCTTACACTACTTCCATAAAGGCTGCCAGAGAAGGATTATTCATAGGGACATCAAGGCTTCAAATATTTTGTTGACTGATGATTCTGAACCCCAGGCTAAACCAATATTAAATGATGGAAACATTGAGAAGCTGGTAGATCCTACACTTGAAGGTGCTTATGATGTCACACAGTTGAAGAGACTTGCCTTTGCAGCCTCTCTATGCATTAGGGCATCCTCAACTTGGAGACCAACCAGAGTAGTGACATCTGCAATAACGAAAGAGACAGTCTGGACAGTGGTTATGCGCGCTAGGGATTTCAGCTCAGATGGTCTGTTCATCGGAATGAAGAAACAGAGGAGGGAGACAATGCGTGAAGACCGTCTGCTTGGCTTGGATCTGTGGAGGCGAGAGGGCTCTGTGGATATAGCAGTGAGAGGGATATAG 966 0.4296 MKYICTNSLKRLFSLKRRSFSEDPLSSTVSTGDENDESLNIFQLTKCPQRPTWKCFSYEEIFEATNGFDSENLVGKGGYAEVYRGTHENGEAIAVKRLTKTSSDERKGKEFLTEIGTIGHVHHPNVSSLLGCFIDNGLYLVFQFSSKGSVTSLLHGNEMNSYWDSTWLTRHKIAIGIACGLHYFHKGCQRRIIHRDIKASNILLTDDSEPQAKPILNDGNIEKLVDPTLEGAYDVTQLKRLAFAASLCIRASSTWRPTRVVTSAITKETVWTVVMRARDFSSDGLFIGMKKQRRETMREDRLLGLDLWRREGSVDIAVRGI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01111 321 Pfam Protein kinase domain 70 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01111 321 Gene3D Phosphorylase Kinase; domain 1 42 144 - -
Pte13g01111 321 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Pte13g01111 321 ProSiteProfiles Protein kinase domain profile. 68 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01111 321 Gene3D Transferase(Phosphotransferase) domain 1 146 213 - -
Pte13g01111 321 SUPERFAMILY Protein kinase-like (PK-like) 49 208 IPR011009 -
Pte13g01111 321 PANTHER OS08G0249100 PROTEIN 212 263 IPR046958 -
Pte13g01111 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Pte13g01111 321 FunFam Putative receptor-like serine/threonine-protein kinase 35 144 - -
Pte13g01111 321 SMART serkin_6 68 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01111 Pte-Chr13 11697471 11705350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01111 56 224 Receptor kinase-like Gene Family AT1G53420 42.353 2.19e-33 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte13g01111 Pkinase 1.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01111 - - qsa:O6P43_002844 312.768