Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01098 ATGATGCTCAAGCGACAGGGTCGTCAGGAATCGCTTTCAGACAAGATTAACAAAATTCGTGGGGTGTTGTTGGTCATTGCCATTCCGCTTGTGCTAATCACATTTGTGCTTTTCCTAATGCCTCCTTATTCTCCAGCACGGTCTGTTCAAGATGTTGCTAAGACAAATCGCAAGGTCGCGTCAAATTTAAGACTCGGTTCTCAGTCTTTCGCTGTCATTTTCGATGCTGGAAGCTCGGGCAGTCGTGTGCACGTCTATTGTTTTGATCAGAATTTGGATCTCGTTCCCGTTGGAGAGGAACTCGAGCTCTTCCTTCATACTGAGCCTGGTTTGAGTGCATATGCTGACGATCCACAAAAGGCTGCGAACTCTTTACAGCCACTGTTGGAGAAAGCAGAAAGTGTTGTTCCTAAAGAATTAAGGCCTAATACGCCGGTTCGAGTAGGGGCAACAGCAGGTTTGAGGCAATTAGGAGCTGAAGCTTCAGATAAAATATTGCAAGCGGTTAAAAATCTCTTGAAACAAAAAAGCAGCCTGAAATCTGATGCTAATGGAGTCACACTACTGTATGGAAGCCAAGAGGGTTCTTATGAATGGGTAACAATAAACTATCTATTGGGTAACCTGGGAAGAAAATACTCGAATACTGTTGGAGTTATTGATCTTGGAGGTGGATCTGTCCAAATGGCATATGCTGTATCAAAGAAGACTGCTGCCGGTGCTCCAAAAGTTCCAGATGGAGAGGATCCATACGTGAAGGAGATGTTTCTCAAGGGGAAACAATATTTCCTATATGTTCACAGTTACTTGAACTACGGTTTGTTAGCAGCTCGAGCAGAGATTTTGAAGGTTACTGGTGATTCCAGCAACCCTTGCATCCTATCAGGCTATCAAGGGTCATACACTTATGGGGGAAAGAATTATAAGGCTGTAGCCTCGCCATCTGGTACAAGTGTGAATGAATGCAGGAGAGTTGTTCTTGACGCCCTCAAAATCAATGCATCCTGCGTTCACGAGAAGTGTACATTTAGCGGTGTCTGGAATGGAGGAGGAGGGGATGGACAGAAGAATCTCTACGTGGCCTCATTTTTCTTTGACAGAGCTGCTGATGCCGGCTTTGCTGATCCCAAAAAACCTGTTGCTATAGTCAGTCCAAGCAATTTCGAAGACGCAGCTAAGCAAGCTTGTGAAACAAAAATTGAAAATGCCAAGGCCAGTTATCCACGTGCTAAGGATACCGACCTCCCATTCTTGTGCATGGATCTTGTGTACCAATATACGTTGCTTTCGGATGGATTGGGCTTATATCCATCTCAAGAAATCACACTGGTGAAGCAAGTGAAATATCAAGATTACCTGGTTGAAGCAGCATGGCCACTAGGCAGTGCCATAGAAGCTGTCTCGTCGGCTAGGTAG 1416 0.4492 MMLKRQGRQESLSDKINKIRGVLLVIAIPLVLITFVLFLMPPYSPARSVQDVAKTNRKVASNLRLGSQSFAVIFDAGSSGSRVHVYCFDQNLDLVPVGEELELFLHTEPGLSAYADDPQKAANSLQPLLEKAESVVPKELRPNTPVRVGATAGLRQLGAEASDKILQAVKNLLKQKSSLKSDANGVTLLYGSQEGSYEWVTINYLLGNLGRKYSNTVGVIDLGGGSVQMAYAVSKKTAAGAPKVPDGEDPYVKEMFLKGKQYFLYVHSYLNYGLLAARAEILKVTGDSSNPCILSGYQGSYTYGGKNYKAVASPSGTSVNECRRVVLDALKINASCVHEKCTFSGVWNGGGGDGQKNLYVASFFFDRAADAGFADPKKPVAIVSPSNFEDAAKQACETKIENAKASYPRAKDTDLPFLCMDLVYQYTLLSDGLGLYPSQEITLVKQVKYQDYLVEAAWPLGSAIEAVSSAR* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01098 471 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 189 204 IPR000407 GO:0016787
Pte13g01098 471 Gene3D - 70 464 - -
Pte13g01098 471 Gene3D Exopolyphosphatase. Domain 2 190 448 - -
Pte13g01098 471 FunFam Apyrase 1 190 448 - -
Pte13g01098 471 CDD NBD_sugar-kinase_HSP70_actin 72 231 - -
Pte13g01098 471 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 469 IPR000407 GO:0016787
Pte13g01098 471 Pfam GDA1/CD39 (nucleoside phosphatase) family 67 469 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01098 Pte-Chr13 11493774 11497206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01098 1 469 Calmodulin-binding Proteins AT3G04080 67.304 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01098 K14641 - qsa:O6P43_006143 648.662