Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01097 ATGGTGAGTGCTATAAAGGCAGCGATCGGAGATGGGGTATTGACATTTGTATGGATCTTTTCTGCATCTTTGATCGAATTAGGGACTAGTATTATAAGAAATGCTGTTGGAATTCGAGATGGATATGAATTCCATGGGGTTGATGTACCTTCTGCGGCTATCACTACCGGTTTTATCTTTATATCCGTTTTTATCTTCAACATCATAGCTGATCTCTTGGGGGGTGCTAGCTTTAATCCTACTGCTACCACTGCTTTATACGCTGCTGGCGTTGGTTCTGACACTCTTACCTCCATGGCTCTGCGGTTTCCAGCACAGGCAGCTGGTGCTGTGGGTGGTGCTATGGCCATCATGGAGGTGATGCAGCAAACGCAATACAAGAACTTGATTGGTGGGCCTCATTTGAAAGTGGACATGCATACCGGAGCTATTGCTGAAGGAGTGTTGACTTTCTTAATAACTTTTTTAGTCCTTATAATTATACTCAAGGGCCCTCGTAACTCAGTCATCCAGGCTTTCTTGCTAGCAGTGACGACGATTGTGTTTGTGGTAACTGGTGCTGCTTACACTGGACCTTCAATGAACCCTGTTAATGCTTACGGTTGGGCATACATATACAACTCACACAACACATGGGAGCAATTCTACGTTTACTGGATTTGCCCTTTTGTAGGTGCTATATCGAGTGCTTGGCTCTTCCGTGCTATCTTTCCCCCTGAAGTTGAAAAGAAGAGGAAGCCGAAGGCAAAGAAGGCCTAG 759 0.4506 MVSAIKAAIGDGVLTFVWIFSASLIELGTSIIRNAVGIRDGYEFHGVDVPSAAITTGFIFISVFIFNIIADLLGGASFNPTATTALYAAGVGSDTLTSMALRFPAQAAGAVGGAMAIMEVMQQTQYKNLIGGPHLKVDMHTGAIAEGVLTFLITFLVLIIILKGPRNSVIQAFLLAVTTIVFVVTGAAYTGPSMNPVNAYGWAYIYNSHNTWEQFYVYWICPFVGAISSAWLFRAIFPPEVEKKRKPKAKKA* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01097 252 PANTHER AQUAPORIN SIP1-1 4 246 IPR044222 GO:0015250
Pte13g01097 252 FunFam Aquaporin SIP1-1 2 250 - -
Pte13g01097 252 Pfam Major intrinsic protein 3 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g01097 252 SUPERFAMILY Aquaporin-like 5 245 IPR023271 -
Pte13g01097 252 Gene3D Glycerol uptake facilitator protein. 2 250 IPR023271 -
Pte13g01097 252 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g01097 252 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g01097 252 PRINTS Major intrinsic protein family signature 98 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g01097 252 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g01097 252 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g01097 252 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01097 Pte-Chr13 11489589 11493010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01097 2 246 Major Intrinsic Protein MIP AT5G18290 51.613 6.34e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01097 K09875 - qsa:O6P43_009795 317.005