Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01070 ATGGAGCAACAACAAGAACAACAAGAGCTACAACTGCTTCAGAAAACCGAGGCGTGTGACTCTTTGGCAGGTGTTGTTGATACTGAGCTTGGCTTTGTCACTGCAGGAGGGGACATTAACTTCATAAAAGGTGGTGGTTACGGGTCATCAAGTCGGATCCTGGATAACCGTGACCAATTGGACCTTGTAGCTGCTGTTACTACAAATGCTGGCACTGTTCAGAGGAAGAAAAGAATGGCTCGGCAGAGGAGACCCTCCAACCTCATGATCAAGCTTCTGCCATTGGGAGCTTCTGGCTCAGCGGGATCACCATCAGCTGCTTCTTCCTCCACCTCCTCGCACGTGGGTTTGGCTTCACCAAGTATTCCTACCTCGTCAACTGTTCAACCTGCACGTGAAATTGATCGCGGAAGCTTAAAATTCCTCTTTCTAAAGGAGCTGAAAAACAGTGATGTAGGTTCCCTCCGTAGAATGGTACTCCCAAAGAAAGCAGCAGAGACTTTCCTTCCTGTCCTTGAATCCAAAGAAGGGATTCCGATTACGATGCACGACATGGATCGTCTGCATGTATGGACCTTCAAGTACAGGTTTTGGCCTAACAACAATAGCCGCATGTATGTGCTAGAAAATACTGGAGAATTTGTTAATGTACATGGCTTACAACTTGGAGACTCCATTATGGTTTACCAAGATAACAAAAACCAGGACTATGTCATCCAGGCTAAAAGAGCAACTGATGAAGTTGAGTGCAGTGATCAAGTAGGGAGGGATACAAGTATCAACAACGATCTTGTTGTTCAAGATTATGTTTTGAATGAGTCCAATGTCTTGAACATGGATTATCCAAGCTTAGTGAATGACAATGGATTGTCATTCATCTATGACACCACTTTCTCAGACGACTCTCCCTTTGATTTTTTGGGTGGATCACTAACCAGTTACTCAAGGATCGGACAAGTAGAAACCTTCGGCTCTGTTGAGAACTTGTCACTTGATGACTTCTATTGA 1008 0.4464 MEQQQEQQELQLLQKTEACDSLAGVVDTELGFVTAGGDINFIKGGGYGSSSRILDNRDQLDLVAAVTTNAGTVQRKKRMARQRRPSNLMIKLLPLGASGSAGSPSAASSSTSSHVGLASPSIPTSSTVQPAREIDRGSLKFLFLKELKNSDVGSLRRMVLPKKAAETFLPVLESKEGIPITMHDMDRLHVWTFKYRFWPNNNSRMYVLENTGEFVNVHGLQLGDSIMVYQDNKNQDYVIQAKRATDEVECSDQVGRDTSINNDLVVQDYVLNESNVLNMDYPSLVNDNGLSFIYDTTFSDDSPFDFLGGSLTSYSRIGQVETFGSVENLSLDDFY* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01070 335 CDD B3_DNA 141 243 IPR003340 GO:0003677
Pte13g01070 335 ProSiteProfiles B3 DNA-binding domain profile. 143 245 IPR003340 GO:0003677
Pte13g01070 335 SMART B3_2 143 245 IPR003340 GO:0003677
Pte13g01070 335 Gene3D - 139 256 IPR015300 -
Pte13g01070 335 SUPERFAMILY DNA-binding pseudobarrel domain 141 239 IPR015300 -
Pte13g01070 335 MobiDBLite consensus disorder prediction 101 130 - -
Pte13g01070 335 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 70 251 IPR044800 GO:0003700
Pte13g01070 335 Pfam B3 DNA binding domain 143 243 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01070 Pte-Chr13 11146322 11149422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01070 46 336 B3 DNA Binding Superfamily AT3G26790 46.875 7.20e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte13g01070 B3 7.6e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01070 K09287 - gmx:100813055 342.813