Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01058 ATGGGGAGGTCTGGGGGCAAGAAGAAGAAGGGCAACTCGAACCAAGTTGCAGCTGATAAAACTACGGCAAGTGCTAATGGCGGTGTTGCTCTGGACTATTCAATTTTTTTGAAAAGAGCCCATGAGTTGAAAGAAGAAGGAAATAGGAGGTTTCAGAATAAGGACTACGTGGGTGCTCTTGATCAATATGATAGTGCTTTGAAATTAACTCCCAAGAACCACCCAGACAGGGCGGTATTTCATAGTAATAGAGCTGCTTGTTTGATGCAAATGAAGCCTACGGATTACGAGACTGTCATTGCTGAGTGTACTATGGCACTTCAGGTTCAGCCTAGGTTTGTTCGAGCCTTGCTTCGCAGGGCTCGGGCGTACGAGGCAATTGGAAAATATGAAATGGCTATGCAAGATGTTCAAGTCCTATTAGCTGCTGAACCGAATCATGGGGATGCTTTAGATATTGCTCGGAGATTAAGGATTGCAGTGGGACCTCGGACCGAAACCCAACAGGACCTTAAGAGCCGCCCTTCACCTGCTGCCCTGGGTGCTTCTGCCGTACGCGGTGCCCCAATTGCTGGGTTGGGGCCGAGTTTGCCTGCTCGTCCTTTACCGAAGAAGGCAAGCAATAGTGCTTTTGGTTCTGTTGTCTCAACTCAAAATAAGCATGAAAGGACTCAGACAATTTCACCTGTTGAGAATGGTCCTGAGCCCAAATCTGAAATGCCTAAACTAATGTTGAAGCCATCGAAGAATTCTTCCATCTCTCTGAATCCAGGCAAGTTATACCAGAAGGATCATTCATTATCTGTCCACGGTCAGCACTCTGACATTCCAGTCCGATGGAGACCACTGAAGCTTGTTTATGATCATGATATAAGACTTGCTCAGGTTCCTGTGGATTGCAATTTCCGGATATTGAGGGAGATAGTTGGGAAAAGGTTTCCGTCATCGAAATCAGTTTTAATCAAGTATAAGGACAATGATGGTGATCTAGTGACTATAACCTGTACTGAAGAACTCAAATTGGCAGAGGCTTGTGTTGATAGCCATCTTCTAAAAGAACCGGATACTGAGAAAAGTGATTCTGTTGCTACATTGAGACTGCATGTTGTTGAAGTGAGCCCTGAACAGGAGCCACCTTTACTGGAAGAAGAGGACGAGAAACCTGTTGAGAGTGAAGGAACTAAGGGAGATGAGAGTGGATCCCATTCTTCCATTGGTGACTCTTCTGTAGAAGCTCGAGAAGCCGATGTTGATAAGAAGGAAAAGGAAACTTCAAAGGAAGAATCAGGTGCTGTGGAAGATCCTGAATGCAAAGAAGTGGAGATAGATGACTGGCTGTTTGAGTTTGCGCAGCTTTTCCGCTCACATGTTGGTATTGATCCTGATGCACATGTTGACCTGCATGAGCTTGGAATGGAGTTCTGTTCTGAAGCACTTGAGGAGACTGTGACAAGTGAAGAGGCTCAAGGACTTTTTGACAAGGCTGCTTTGAAGTTCCAGGAGGTAGCTGCCTTGGCTTTCTTCAATTGGGGAAATGTTCACATGTGTGCTGCAAGAAAGCGGATCCCCTTGGATGAACCTGCTGGAAAGGATGTAGTGGCATCACAACTTCAAGTGGCTTATGATTGGGTTAAGGAGAAGTATAGATTGGCCAGAGAGAAGTACGAAGAGGCACTCGTGATAAAACCGGACTTCTATGAAGGATTGTTGGCTTTGGGGCAGCAACAATTTGAAGTGGCCAAACTTGACTGGTCATTTGCACTGGCAAAGAAGATAGATCTCTCAGAATGGGATTCTACAGAGACACTTAAACTTTTTGATAGTGCAGAAGAAAAGATGAAGGCAGCAACTGAGATGTGGGAAAAGTTGGAGGAGCAAAGAGCGAAGGAGCTGAAGGATCCAGCTGCATGTAAAAAAGAAGAATTATGGAAACGAAGAAAGAAACAAGGTAGTGCCACAGAGGCCGAGTCTTCCAGTGTTGGAGCTCAGGTTGATGTTTCTGCTGATGAAGCAGAACAAGCAGCTCTTATGAGGTCACAGATTCATCTCTTCTTGGGGAATATGCTTTTTGAACGATCTCAAGTTGAATATAAAATAGGGCAGGATGGTTGGAAGAAAAAACTAGATGCTGCTATTGAGCGATTTAAGCTTGCTGGTGCCTCTGAGTCCGACATTTCAATGGTTCTTAAGAATCATTTTTCAAATGTGGATGCAGTGGAGATGACAAAAGATTCAAAATGTGAAAAGTAA 2250 0.4462 MGRSGGKKKKGNSNQVAADKTTASANGGVALDYSIFLKRAHELKEEGNRRFQNKDYVGALDQYDSALKLTPKNHPDRAVFHSNRAACLMQMKPTDYETVIAECTMALQVQPRFVRALLRRARAYEAIGKYEMAMQDVQVLLAAEPNHGDALDIARRLRIAVGPRTETQQDLKSRPSPAALGASAVRGAPIAGLGPSLPARPLPKKASNSAFGSVVSTQNKHERTQTISPVENGPEPKSEMPKLMLKPSKNSSISLNPGKLYQKDHSLSVHGQHSDIPVRWRPLKLVYDHDIRLAQVPVDCNFRILREIVGKRFPSSKSVLIKYKDNDGDLVTITCTEELKLAEACVDSHLLKEPDTEKSDSVATLRLHVVEVSPEQEPPLLEEEDEKPVESEGTKGDESGSHSSIGDSSVEAREADVDKKEKETSKEESGAVEDPECKEVEIDDWLFEFAQLFRSHVGIDPDAHVDLHELGMEFCSEALEETVTSEEAQGLFDKAALKFQEVAALAFFNWGNVHMCAARKRIPLDEPAGKDVVASQLQVAYDWVKEKYRLAREKYEEALVIKPDFYEGLLALGQQQFEVAKLDWSFALAKKIDLSEWDSTETLKLFDSAEEKMKAATEMWEKLEEQRAKELKDPAACKKEELWKRRKKQGSATEAESSSVGAQVDVSADEAEQAALMRSQIHLFLGNMLFERSQVEYKIGQDGWKKKLDAAIERFKLAGASESDISMVLKNHFSNVDAVEMTKDSKCEK* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01058 749 MobiDBLite consensus disorder prediction 209 232 - -
Pte13g01058 749 PANTHER PROTEIN CLMP1 1 743 IPR044517 -
Pte13g01058 749 MobiDBLite consensus disorder prediction 373 435 - -
Pte13g01058 749 MobiDBLite consensus disorder prediction 1 20 - -
Pte13g01058 749 SMART tpr_5 40 73 IPR019734 GO:0005515
Pte13g01058 749 SMART tpr_5 78 113 IPR019734 GO:0005515
Pte13g01058 749 SMART tpr_5 114 147 IPR019734 GO:0005515
Pte13g01058 749 SUPERFAMILY CAD & PB1 domains 278 343 - -
Pte13g01058 749 ProSiteProfiles PB1 domain profile. 280 372 IPR000270 GO:0005515
Pte13g01058 749 MobiDBLite consensus disorder prediction 192 239 - -
Pte13g01058 749 Pfam PB1 domain 280 371 IPR000270 GO:0005515
Pte13g01058 749 SUPERFAMILY TPR-like 37 163 IPR011990 GO:0005515
Pte13g01058 749 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Pte13g01058 749 Gene3D Tetratricopeptide repeat domain 37 158 IPR011990 GO:0005515
Pte13g01058 749 MobiDBLite consensus disorder prediction 409 435 - -
Pte13g01058 749 SMART PB1_new 280 372 IPR000270 GO:0005515
Pte13g01058 749 Coils Coil 606 626 - -
Pte13g01058 749 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Pte13g01058 749 CDD PB1 283 369 - -
Pte13g01058 749 Gene3D - 282 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01058 Pte-Chr13 10931642 10935242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01058 37 158 Calmodulin-binding Proteins AT3G25230 28.571 3.40e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01058 K26538 - qsu:111997405 1108.59