Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01047 ATGGGCTACTGGTCATGTTTTGGGTCTTGGAGGAGGAGGAGACGCAGCAAGGCTGAGGACAATAGTTGCAACAGTGAAACTCGAATGGTTGCAAAAGCTGAGAAGAACACATCCGAATCTGTGAACCGCACCCCCGAAAAACCTTCTGAGCCTGAAAGAGACTTATCCGTTGAACCAGTGGTATCCAGTAAGGTATTTACCTTTGGAGAACTTGCTTACGCTACTGAGAATTTCAGAGATGAGTCATTCATTGGGCAAGGCGGATTTGGATCTGTCTACAAAGGCAAGTTAGAAAGAACTGGTCAGGTGGTAGCTGTTAAAAAACTTGACCAGACAGGTGTCCAAGGAGACAGAGAGTTTCTGGTTGAAGTTCTCATGCTTTCGCTCATGCGTCATTCTAACCTTGTCAACTTGGTTGGTTACTGTGCAGAAGGGAACCAAAGGCTTCTTGTATATGAGTTCATGCCCTTGGGGTCCTTGGAAAGCCGCCTCCATGATCGTTCCCCTAATGTGAAGCCATTAGACTGGAACACAAGGATGATGATAGCTATGGGGACAGCAAAAGGATTGAATTATCTACACAATGAAGCTGATCCTCCTGTTATATACAGGGATCTAAAATCAGCCAACATATTACTGGACGTAGATTGTCATCCAAAGCTCTCTGATTTTGGTCTAGCCAAATTTGGTCCAAGTGGCGATAAGACACATGTGTCCACCAGAGTTATGGGAACCCATGGTTATTGTGCCCCAGAATATGCGATCACTGGAAAATTGACATCTAAATCTGACATATACAGTTTTGGGGTGGTCTTGTTGGAGCTCATCACTGGAAGGAGAGCACTAGATGAGGAACGTGGCGATGACAGACTTCTCGTTGCATGGGCAAGGCCATGGATGGAAGACCGACAGACTTGCTCACGATTAGGAGACCCGGATTTGCGTGGTCAAGTCTCAGAGTCTGTTCTAACAAAGGCAATAAAAGTAGCATCCATGTGTCTCAGAGAAAACCCTGGAACCCGCCCTCAGATAAGTGATGTTGTGCTTGCTCTAGATTTCATAGCATCCTGTATGCCAAACTCTCGTAAGAAAAATAAAGGGGATCGACGGAGTGCTGATGAGCCTCAGAACGACAAAACGAAGGTACAGAAGAAAGATCGAGAGGTAGCTGTTGCAGAGGCCAAGATGTGGGCAGAAGCTTTCACAGAAAACAGACGCCGAGGTCCGAGTAAAGATGATGAAAATATCACAAGTAGGTGA 1260 0.4587 MGYWSCFGSWRRRRRSKAEDNSCNSETRMVAKAEKNTSESVNRTPEKPSEPERDLSVEPVVSSKVFTFGELAYATENFRDESFIGQGGFGSVYKGKLERTGQVVAVKKLDQTGVQGDREFLVEVLMLSLMRHSNLVNLVGYCAEGNQRLLVYEFMPLGSLESRLHDRSPNVKPLDWNTRMMIAMGTAKGLNYLHNEADPPVIYRDLKSANILLDVDCHPKLSDFGLAKFGPSGDKTHVSTRVMGTHGYCAPEYAITGKLTSKSDIYSFGVVLLELITGRRALDEERGDDRLLVAWARPWMEDRQTCSRLGDPDLRGQVSESVLTKAIKVASMCLRENPGTRPQISDVVLALDFIASCMPNSRKKNKGDRRSADEPQNDKTKVQKKDREVAVAEAKMWAEAFTENRRRGPSKDDENITSR* 420
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01047 419 SMART serkin_6 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01047 419 Gene3D Phosphorylase Kinase; domain 1 35 154 - -
Pte13g01047 419 MobiDBLite consensus disorder prediction 362 389 - -
Pte13g01047 419 SUPERFAMILY Protein kinase-like (PK-like) 64 361 IPR011009 -
Pte13g01047 419 FunFam probable serine/threonine-protein kinase RLCKVII 52 154 - -
Pte13g01047 419 MobiDBLite consensus disorder prediction 361 389 - -
Pte13g01047 419 MobiDBLite consensus disorder prediction 39 54 - -
Pte13g01047 419 MobiDBLite consensus disorder prediction 23 38 - -
Pte13g01047 419 Gene3D Transferase(Phosphotransferase) domain 1 155 380 - -
Pte13g01047 419 MobiDBLite consensus disorder prediction 12 56 - -
Pte13g01047 419 CDD STKc_IRAK 84 348 - -
Pte13g01047 419 ProSiteProfiles Protein kinase domain profile. 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01047 419 MobiDBLite consensus disorder prediction 400 419 - -
Pte13g01047 419 Pfam Protein kinase domain 79 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01047 419 FunFam Serine/threonine-protein kinase PBS1 155 370 - -
Pte13g01047 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pte13g01047 419 PANTHER OS07G0668900 PROTEIN 25 363 - -
Pte13g01047 419 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte13g01047 Pte-Chr13 10752171 10755462 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01047 1 410 Glycoside Hydrolase AT3G07070 51.559 3.78e-141 407
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte13g01047 Pkinase 1e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01047 K13430 - qsa:O6P43_009734 486.493