Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01043 ATGATCAATTCACTTTGTGGAAGCATGGGGTCAATCAAGACTGAGACTCTTCTACATGTCAAGTCATCACGCCCTTCTTCTCCAAACGAGTTATCGGTTTCTGAATCAAAAAAGAGTACCAGTGCCAGTGGCAGTGCTTCCTGTGATTTGGAGCAGAATCCTCTAACCCCACGAAGCCTAGGCCTTCTTGGACGCAAGTATGATAATCTGGAAGGAGAAGGAGACGCACAGTCACCTGAGAATTCGATATGGGAGTCATTCTTCTCCGATAACTTAGAGTCTGATTTTATGATATGCTCGCCTGTGAGGAATGTGCCTTCACCTCAGACCTCCATGCACAACTATAACTACAACTATGCTAATGCAATGCAGGGGCAAAGTGTTTCAGGGTGTTCACCACCTCGGTTTTCTTCTCAGATAGGTTCATATTCAAGTAGCATGAAAGGGAAGGGACTAAGTCCACTTCATAAGGTATGTAACTCTCCGAATAATCAGTATATGCAATCGGTGGAGGGTCTGTCACTGCCAGCAATTGAAGAGTTTCTGGAGGATTATCATAGAGATGGTCTAGAAGAAGAGTTCTCACCCAAAATCTCTGATATTGGAAGCTCAAACAGCTTTGACATTCCAACTAGAATCCCATCCTTGTTGGACAACATGATGATGTCGTATTCATCGAAGTTTAGTGGATCAAGGAGTGAAAAATCAGCCTCCCCACATGGTGATGATCGATCTCCACTTAGACAAGAGCGTGATGTTGATCATCATCCGACTGTAGGATCGATTGGAAATCGTGTATCATTCTCTGAAGTCTTGAGACAAGAGCGCCTTAAGGAGAAGATGCCGCGAAAACAGCACCAGCAGCAACCACATCCTCAAGAGCACAAATCCCTTGGCCAAAGCTTGATGATCCCTCTTTCTATGGAAACTGAACAGGAGCAAGACAGTGGGCTACAATTGGTGCATCTCCTTCTAGCTTGTGCAGAAGCAGTAGCCAAAGAGGACTACATGTTAGCAAGAAGGTACCTGCACCATCTAAACCGTGTAGTGACACCTCTAGGTGACTCCATGCAACGTGTTGCCTCATGTTTCACTGAAGCCTTGAGCGCAAGACTGGCTGCAACCCTAGCAACAAAACCTAGTACCTCAAATATTCCAAAACCACCCTTCTCTCCTTTCCTACCAAACTCACTGGAAATCCTCAAAATCTATCAGATCCTCTATCAGGCCTGCCCTTACGTCAAGTTTGCTCACTTCACTGCAAATCAAGCAATTTTTGAAGCCTTTGAAGCAGAAGAACGTGTCCATGTTATCGACCTAGACATCCTTCAAGGCTACCAATGGCCTGCTTTCATGCAAGCCTTAGCAGCCCGTTCTGGAGGGGCTCCGTTCCTCCGGGTAACTGGTATCGGGCCCTCTATAGAGGCTGTGAAGGAGACAGGTAGGTGTTTGACTGAATTAGCTCATTCTCTGCATGTCCCTTTTGAATTTCACCCGATTGGTGAACAACTTGAAGACCTGAAACCACATATGTTCCAACGAAGAGTTGGGGAGGCTCTAGCCGTTAATTCCGTCAACCGGCTCCACCGTATTACAGGAAACAGCTTAGGAAATTTACTAGCAATGATAAGAGATCAAGCCCCCAAGATATTTACCTTAGTAGAGCAAGAAGCAAGCCACAATGGCCCATATTTTCTGGGCAGGTTTCTTGAGGCATTACATTATTACTCTGCCATATTTGACTCATTAGATGCCACTTTTCCTCCTGACTCAGCTCAAAGAACAAAGGTTGAGCAGTATATATTTGCGCCAGAGATAATGAACATCGTTGCATGTGAAGGTGCAGAGAGAATTGAGAGGCATGAGAGGCTAGACAAGTGGAGGAAGAAAATGGAAGGGAAAGGATTCAAAGAAGTGCCGTTGAGTGCAAATGCTGTTACTCAGTCTAAGATATTATTGGGTTTGTATTCATGTGATGGTTACAAATTAACAGAGGACAAGGGTTGTTTGCTGTTGGGTTGGCAAGATAGAGCTATCCTAGCTGCGTCTGCATGGAGGTGCTGA 2064 0.4516 MINSLCGSMGSIKTETLLHVKSSRPSSPNELSVSESKKSTSASGSASCDLEQNPLTPRSLGLLGRKYDNLEGEGDAQSPENSIWESFFSDNLESDFMICSPVRNVPSPQTSMHNYNYNYANAMQGQSVSGCSPPRFSSQIGSYSSSMKGKGLSPLHKVCNSPNNQYMQSVEGLSLPAIEEFLEDYHRDGLEEEFSPKISDIGSSNSFDIPTRIPSLLDNMMMSYSSKFSGSRSEKSASPHGDDRSPLRQERDVDHHPTVGSIGNRVSFSEVLRQERLKEKMPRKQHQQQPHPQEHKSLGQSLMIPLSMETEQEQDSGLQLVHLLLACAEAVAKEDYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLATKPSTSNIPKPPFSPFLPNSLEILKIYQILYQACPYVKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARSGGAPFLRVTGIGPSIEAVKETGRCLTELAHSLHVPFEFHPIGEQLEDLKPHMFQRRVGEALAVNSVNRLHRITGNSLGNLLAMIRDQAPKIFTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRTKVEQYIFAPEIMNIVACEGAERIERHERLDKWRKKMEGKGFKEVPLSANAVTQSKILLGLYSCDGYKLTEDKGCLLLGWQDRAILAASAWRC* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01043 687 Pfam GRAS domain family 320 686 IPR005202 -
Pte13g01043 687 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 276 680 IPR005202 -
Pte13g01043 687 MobiDBLite consensus disorder prediction 19 60 - -
Pte13g01043 687 MobiDBLite consensus disorder prediction 19 54 - -
Pte13g01043 687 MobiDBLite consensus disorder prediction 278 298 - -
Pte13g01043 687 MobiDBLite consensus disorder prediction 226 265 - -
Pte13g01043 687 MobiDBLite consensus disorder prediction 236 258 - -
Pte13g01043 687 ProSiteProfiles GRAS family profile. 311 686 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01043 Pte-Chr13 10704612 10706793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01043 314 687 GRAS Transcription Factor Family AT1G66350 45.119 3.91e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte13g01043 GRAS 7.6e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01043 - - pvy:116129933 921.768